| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0776 |
|---|
| Symbol | nusA |
|---|
| ID | 3581341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 917850 |
|---|
| End bp | 918839 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637684469 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_288837 |
|---|
| Protein GI | 72161180 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.387304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATATCG ACATGAGTGT CCTGCGCAGT CTGGAACGCG AGAAGGACAT CTCGGTGGAC
CTCGTCGTCA AAGCCATCGA GGACGCGCTC CTGATTGCGT ACCGCCGCCA GGAGGGGCCC
GACACCAACG CCAGGGTGGA ATTGGACCGC GCTACGGGAC ACGTCACGGT GTGGGCCGAA
GAGCGCGACG AAGAGGGGCG GCTGATCCGG GAATACGACG CCACCCCCTC CGGGTTCGGG
CGGATCGCCG CGTCCACGGC GAAGCAGGTC ATCCTGCAGC GGCTGCGGGA CGCCGAGGAC
GAGATCACCC TGGGCGAGTT CGCCGGGCGG GAGTCCCAGA TCGTCTCCGG TGTCGTCCAG
CAGGGCAAGG ACCCGCGCAA CGTGCTGGTC GACCTGGGAC GGGTCGAGGC GATCCTGCCG
CCGCAAGAGC AGGTACCCAC CGAGACCTAC ACCCACGGTG AGCGGCTGCG GGCCTATGTC
GTGCAGGTCC GCCGGGGGCA CCGCGGCCCT TCGATCACCC TGTCGCGCAC CCATCCCAAC
TTGGTGCGCA AGCTCTTCGA GCTCGAGGTT CCCGAGATCG CCGACGGCAC GGTCGAGATC
GCAGCGATCG CGCGGGAAGC GGGCCACCGC ACCAAGATGG CGGTCAAGTC CAACAAGCCC
GGCGTCAACG CGAAGGGCGC GTGCATCGGA CCGCTTGGCA GCCGTGTCCG CAATGTGATG
AACGAGCTGC GCGGGGAGAA GATCGACATT GTCGACTACT CGGACGACCC GGCGCAGTTC
GTCGCGAACG CCCTGTCGCC GGCCCAGGTG ACGCACGTGG AAGTGCTTGA CGCTGCGGCG
CGGGTGGCGC GGGTCATCGT GCCCGACTAC CAGCAGTCGC TGGCGATCGG CAAAGAGGGG
CAGAACGCGC GGCTGGCTGC CCGCCTGACC GGGTGGCGCA TCGACATCCG CTCGGACACG
GAGATGGCCG AACAGCACGG CGAGGAATAG
|
|---|
| Protein sequence | MDIDMSVLRS LEREKDISVD LVVKAIEDAL LIAYRRQEGP DTNARVELDR ATGHVTVWAE
ERDEEGRLIR EYDATPSGFG RIAASTAKQV ILQRLRDAED EITLGEFAGR ESQIVSGVVQ
QGKDPRNVLV DLGRVEAILP PQEQVPTETY THGERLRAYV VQVRRGHRGP SITLSRTHPN
LVRKLFELEV PEIADGTVEI AAIAREAGHR TKMAVKSNKP GVNAKGACIG PLGSRVRNVM
NELRGEKIDI VDYSDDPAQF VANALSPAQV THVEVLDAAA RVARVIVPDY QQSLAIGKEG
QNARLAARLT GWRIDIRSDT EMAEQHGEE
|
|---|
| |