| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0757 |
|---|
| Symbol | |
|---|
| ID | 3579365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 894069 |
|---|
| End bp | 896468 |
|---|
| Gene Length | 2400 bp |
|---|
| Protein Length | 799 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637684450 |
|---|
| Product | TPR repeat-containing regulatory protein LuxR |
|---|
| Protein accession | YP_288818 |
|---|
| Protein GI | 72161161 |
|---|
| COG category | [K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG3903] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGA ATACGACGCA GGTGCAGCAG AACCTTCCCC TGGAACTCGA CAGTTTCGTC
GGCCGTGCCC GCGACCTCGA TGCCATCCTC CGTCTGCTGG GGGTCCACCG GGTCGTCACC
CTGTGCGGGA TGGGAGGGAT CGGAAAGACT CGGCTGGCTC TGCGGGCCGC GGCGCAGGCA
GTGGACCGGT TCTCCGACGG CGTGTGGCTG TGCGAAATGT CCGAGACCAC GACCCGCGAG
GCGGTGGCGG CGCGGATTGC GTGCGTCCTC GGGGTGCGGA GCGACCACGA GTGCGCTCCC
GACCAGGTCC TCGTCGACCT GCTGCGTTCC CGCCGCCTGC TGCTGGTGTT GGACAACTGC
GAGCACGCGG TCCAGCACGT CGCTTCCGTG ATCGAGCAGC TGCTGCCCCG CTGCCCGAAC
GTCTCTTTCC TGGTGACCAG CCGGGAACCG CTGCATATCG AAGGGGAGGC GCTGTGGCGG
GTCCCGCCGT TGACCGTGCC TGACCCCGGC CACGGGGACC CGCTCGAAGC GGAATCCGTC
CAGTTGTTCG TGGACCGGGC CCGCGCGCAT GCCCACGATT TCACCGTGAC ACCCGAGCGG
TTGGAGGCGA TCGCGACGAT CTGCCGCCGC CTCGACGGCA TCCCCTTGGG GATCGAACTG
GCTGCCGCCC GGGTGCGGCT GCTGTCGGTC GCGCAGATCG CCGAACGGCT CCGCGACCGG
TTCACCATGC TGACGTACGG CGACCGGAAT GCTCCGGTGC GCCAGCGGAC GCTGCGTGCG
GTCCTCGACT GGAGCTACGA CATGCTGGAC GAGCCGGAGC GGCGGCTGTT GCGCCGGCTG
TCCGTGTTCT CCGACTGGGA TCTGGACTTG GCTGAACGGG TCTGCGCGGA TGAGAGCCTG
CCCGCGCACT GCCTGTTGGA CTTGATGGTC TCGCTGGTGG ACCGTTCCTT AGTCACCGTG
GTCGGGGAAG TCCAGGGCCG GATGCGGTAC CGGATGCTGG ACACGATCCG GCAGTACGCG
TTAGCCCGGC TGGCGGAGAG CGGGGAGGAG ACGCGGCTGC GGCTGCGCCA CCGGGAGCAG
GTCCTGGCGC TCGCTGAAGA GCTGGCGCAC TATGCCGTCG CCGGGTACGG CGTCTCGTGG
GAGCAGCGGT TCTCCGCGTT CCAGCGGGTG TGCGCGGAGC GCGACAATGT GCGGACCGCG
CTCACCTGGT CGGCGGAGCG CGGGGACGTT GTTGAAGGGC TGCGGCTGTG TGTGGCGCTG
CGCCCGTATT GGATGGTCAA CGGTCTGCTC GCGGAGGGGG CCTATTGGAC CGACCGTTTC
TTGGCCATGG ACTGCGCCGA TGAGACGCTG CGCGGGCAGG CGATGGTGCG CCGGGCTGAA
CTGGCGTGGG ACCGCGCTGA CCCGTCTCAC GCGGTCACGA TCGGCGAGGA AGGGCTCCGG
CTCTGCCAGC AGGCGGGGGA CCACGGGTCG GTGGCGCTGG GGTTGAACAT TCTGGCGATG
AGCGATATCC GCGCGGGACG GTTTGACCGG GCTGAGCAGC GGCTTGCCGA GTCGGTCACG
TTGACGCGCG CCACCGACGA CCCGTGGAAC GAGGGGATTG CCCGCAGCAC CCAGGGGGCG
TTGGCGGCCC GGCAGGGCCG GTGGGAGGAG GCCCGGGACC GCTACGAGGA GGCGCTGACC
CTGCTGCGCA CGATCGACCA CTGGTGGGGG GTGGGGATCA CGCTCATCGG CCGGGGCCGG
GTCGCGGAAG CGAGCGGGGA TCTCCGCGGG GCAGAGCGGT GCTTCCGGGA GGCTTTGGAC
ATTCAGCGGA TGATCGGCGG TCCCCCGGAG CTGGCCCGCT GCCTGGCCGG GGTGGGCCGG
GTCTTGGCCA GTCAGGGCAA GGTCGCGGAA GCCTACCGCT GCCTGCAGGA GAGTCTGACG
CTCTGCCACA ACACCGGGCA GCGGCTGGGG ACGGCCCGCG GACTGCTTGC GATCGCCAAG
GTGGCGCTGG CCGAGGGGCG TGCGGACGAG GCCACCCGGT TGGCGGGGGC GGCGGATGCG
CTCCGGGAGC GTTCTGGGCA TCCCGCCCCG CGGAAGAAGT GGCCGCTGCA GGGCGGGACG
TTCACGCTGC GGTGGGAGGA GGGCCGCCGC ATGGACTCTG ACGAGGCGGT CTGTGCCGCT
GTGCAGGTGG CGGAAGCGGG GGCGGCGTCG GATGCTGCTC CGCTGCTCGA CGCGGACGAG
GCGGTGCTCA CCCCGCGGGA GCGCGAGGTG GCCGAGCTGA TTGGCCAGGG GATGAGCAAC
CGGTCGATTG CGGAACGGCT GTTCATCAGT CCGGCAACAG TGGCCCGGCA CGTGGCCAAT
ATCAACACGA AACTGGGGTT CACCTCCCGA AACCAGATCG CTGCGTGGAT CAACCGTTGA
|
|---|
| Protein sequence | MATNTTQVQQ NLPLELDSFV GRARDLDAIL RLLGVHRVVT LCGMGGIGKT RLALRAAAQA
VDRFSDGVWL CEMSETTTRE AVAARIACVL GVRSDHECAP DQVLVDLLRS RRLLLVLDNC
EHAVQHVASV IEQLLPRCPN VSFLVTSREP LHIEGEALWR VPPLTVPDPG HGDPLEAESV
QLFVDRARAH AHDFTVTPER LEAIATICRR LDGIPLGIEL AAARVRLLSV AQIAERLRDR
FTMLTYGDRN APVRQRTLRA VLDWSYDMLD EPERRLLRRL SVFSDWDLDL AERVCADESL
PAHCLLDLMV SLVDRSLVTV VGEVQGRMRY RMLDTIRQYA LARLAESGEE TRLRLRHREQ
VLALAEELAH YAVAGYGVSW EQRFSAFQRV CAERDNVRTA LTWSAERGDV VEGLRLCVAL
RPYWMVNGLL AEGAYWTDRF LAMDCADETL RGQAMVRRAE LAWDRADPSH AVTIGEEGLR
LCQQAGDHGS VALGLNILAM SDIRAGRFDR AEQRLAESVT LTRATDDPWN EGIARSTQGA
LAARQGRWEE ARDRYEEALT LLRTIDHWWG VGITLIGRGR VAEASGDLRG AERCFREALD
IQRMIGGPPE LARCLAGVGR VLASQGKVAE AYRCLQESLT LCHNTGQRLG TARGLLAIAK
VALAEGRADE ATRLAGAADA LRERSGHPAP RKKWPLQGGT FTLRWEEGRR MDSDEAVCAA
VQVAEAGAAS DAAPLLDADE AVLTPREREV AELIGQGMSN RSIAERLFIS PATVARHVAN
INTKLGFTSR NQIAAWINR
|
|---|
| |