| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0749 |
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| Symbol | ispG |
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| ID | 3578954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 883104 |
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| End bp | 884261 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637684442 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_288810 |
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| Protein GI | 72161153 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.288883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCGTCG ATCTCGGAAT GCCCGTTGCT CCTCCGCAGC CGCTGGCGCC GCGCCGCAAA
ACGCGGCAGG TCATGGTCGG CAACGTCCCC GTGGGCGGCG ACGCTCCTAT CTCGGTGCAG
TCGATGACCA CCACGGTCAC CGCGGACATC AACGCCACGC TGCAGCAGAT CGCCGAGCTG
ACCGCGGCGG GGTGCCAGAT CGTGCGGGTC GCGGTGCCGA GCGCCGACGA CGCTGAAGCG
CTGCCGATCA TCGCGAAGAA ATCGCAGATC CCGGTGATCG CCGACATCCA CTTCCAGCCC
AAGTACGTGT TCGCCGCGAT CGACGCGGGC TGCGCGGCGG TACGCGTCAA CCCGGGCAAC
ATCAAGAAGT TCGACGACAA GGTCGGGGAG ATCGCCAAGG CCGCCTCTGA AGCGGGGATC
CCGATCCGGA TCGGCGTCAA CGCCGGGTCG CTGGACAAGC GGCTGCTCGC CAAGTACGGC
AAGGCCACGG CCGAAGCGCT CGTGGAATCA GCCCTGTGGG AGTGCTCCCT GTTCGAAGAG
CACGGCTTCC ACGACATCAA GATCTCGGTC AAGCACCACG ACCCGGTCGT CATGATCCGC
GCCTACCGGA TGCTCGCCGA ACGCTGCGAC TACCCGCTGC ACCTGGGGGT CACCGAAGCG
GGCCCGGCCT TCCAAGGCAC GATCAAGTCC GCGGTGGCTT TCGGTGCACT GCTGGCCGAA
GGTATCGGCG ACACGATCCG GGTCTCCCTG TCGGCTCCCC CCGCGGAAGA GGTCAAGGTC
GGCATCCAGA TCCTGGAGTC GCTCGGGCTG CGGCAGCGCG GCCTGGAGAT CGTCTCCTGC
CCGAGCTGCG GACGGGCCCA AGTCGACGTC TACACCCTCG CCAACCGGGT CACCGCGGGC
CTGGAAGGGC TGGACGTGCC GCTGCGCGTG GCGGTCATGG GATGCGTGGT CAACGGCCCC
GGTGAGGCCC GTGAAGCGGA CCTGGGCGTG GCCTCCGGCA ACGGCAAGGG CCAGATCTTC
GTCAAGGGCA AGGTCATCAA GACGGTGCCG GAGTCGCAGA TCGTGGAAAC CCTGATCGAG
GAGGCTCTGC GGATCGCTGA GGAGATGCGC GCCGAAGGCG TGCCCTCGGG CCAGCCCAGC
GTGGACGTGG CGGGCTAG
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| Protein sequence | MSVDLGMPVA PPQPLAPRRK TRQVMVGNVP VGGDAPISVQ SMTTTVTADI NATLQQIAEL
TAAGCQIVRV AVPSADDAEA LPIIAKKSQI PVIADIHFQP KYVFAAIDAG CAAVRVNPGN
IKKFDDKVGE IAKAASEAGI PIRIGVNAGS LDKRLLAKYG KATAEALVES ALWECSLFEE
HGFHDIKISV KHHDPVVMIR AYRMLAERCD YPLHLGVTEA GPAFQGTIKS AVAFGALLAE
GIGDTIRVSL SAPPAEEVKV GIQILESLGL RQRGLEIVSC PSCGRAQVDV YTLANRVTAG
LEGLDVPLRV AVMGCVVNGP GEAREADLGV ASGNGKGQIF VKGKVIKTVP ESQIVETLIE
EALRIAEEMR AEGVPSGQPS VDVAG
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