| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0747 |
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| Symbol | |
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| ID | 3578952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 880259 |
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| End bp | 881473 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637684440 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_288808 |
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| Protein GI | 72161151 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.281464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCA GAGTCGTCAT CCTCGGCTCC ACCGGATCGA TCGGCACCCA AGCCATCGAG
GTGGTCCGGC AAGAACCCCA CCGCTTCGAC GTAGTCGGAC TCGCCGCTGG CGGCGGACGC
CTCGACCTGC TCGCCGACCA AGCCTGCGCC CTCGACGTCC AAGCCGTCGC GGTCGCCGAC
GCCGTCAAAG CCGCTGAACT GCGCGACAAG CTCTCCGCAC GGGGCAGTGC CGCCAAAGTC
CTAGCCGGAC CCGAAGGAGT CGCGGAGCTC GCCGCCTGGG ACTGCGACGT GGTGCTCAAC
GGCATCACCG GGGCGCTCGG CCTGGAATCC ACCCTCGCTG CGCTGCGCGC CGGACGGCTG
CTCGCCCTTG CCAACAAAGA ATCGCTGATC ATCGGCGGCC CGCTCGTCCG GGAGCTCGCC
GTCCCCGGAC AGATCGTGCC CGTGGACTCC GAGCACTACG CGATCGCCCA GTGCTTCCCC
CGCCTGCCCG CCGACCAGCT CACCAGCCTG GCGCAAGGCA ACCTCGCCGC CCGCCGCGAC
CACGTGCGCC GCCTCGTCAT CACCGCCAGC GGCGGACCGT TCCGCGGCCG CTCCTCCGCC
GAGCTCGCCG ACGTCACCCC CGAGCAGGCG CTCGCCCACC CCACGTGGCG CATGGGCCCG
GTCATCACCA TCAACTCCGC GACCCTGGTC AACAAAGGGC TGGAAGTCAT CGAAGCGCAC
CTGCTCTTCG ACATCCCCTT CGAACAGATC GAGGTCGTCG TCCACCCGCA GTCGGTCATC
CACTCGATGG TGGAGTACGT CGACGGCTCC ACCATCGCCC AGGCGAGCCC GCCCAGCATG
CGCATCCCCA TCGCCTACGG CATCGCCTGG CCGGACCGGG TCCCGGAAGC CGCTCCCGCC
ATCGACTGGA CCCGGGCCCA CCAGTGGACC TTCGAACCCC TCGACCACGA GGCGTTCCCC
GCCGTGCGGC TGGCCTGCGA AGTCGGATCT GTGGGCGGGA CCGCGCCGGC CGTGTACAAC
GCCGCCAACG AGGAGGCCGT CGCCGCTTTC CTCGCCGGGC GTCTGGCATT TCCGGCGATC
CTGGACACCG TGGCGCGGGT AGTCTCAGAA CACCGGGGAG AGAGCCGAGG GACTGTGCCG
CGGCTCGAAG ACGTCTACGA AGCCGACGAC TGGGCCCGAC AACGGGCCAA GGAGCTCATC
TCCCGGCAGG GATGA
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| Protein sequence | MPRRVVILGS TGSIGTQAIE VVRQEPHRFD VVGLAAGGGR LDLLADQACA LDVQAVAVAD
AVKAAELRDK LSARGSAAKV LAGPEGVAEL AAWDCDVVLN GITGALGLES TLAALRAGRL
LALANKESLI IGGPLVRELA VPGQIVPVDS EHYAIAQCFP RLPADQLTSL AQGNLAARRD
HVRRLVITAS GGPFRGRSSA ELADVTPEQA LAHPTWRMGP VITINSATLV NKGLEVIEAH
LLFDIPFEQI EVVVHPQSVI HSMVEYVDGS TIAQASPPSM RIPIAYGIAW PDRVPEAAPA
IDWTRAHQWT FEPLDHEAFP AVRLACEVGS VGGTAPAVYN AANEEAVAAF LAGRLAFPAI
LDTVARVVSE HRGESRGTVP RLEDVYEADD WARQRAKELI SRQG
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