| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0720 |
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| Symbol | |
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| ID | 3581994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 839538 |
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| End bp | 844010 |
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| Gene Length | 4473 bp |
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| Protein Length | 1490 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637684413 |
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| Product | superfamily protein I DNA/RNA helicase |
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| Protein accession | YP_288781 |
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| Protein GI | 72161124 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCGG AGACTGCGCG ACAGGACACC GAAATCGCAC GCCGCATCTT CCGTTTCCTC
GCGGAAGCAG AACAGACACG GCTCCGTCCG ATCAGGACGC TCAGCTCCGC CCATCGAAAA
CTCTGGTTCA GCGAACTTCC CACAGGCAGC GACTACGTGG CCTCTGGCCT GCTCGATCCA
GACCAGAAGG CGTGGCTCCG CATCAAGAGG ATCCACCAGC AAGAACCACC AGCAGTCCCT
GAGGTGCTCG AACCCTGGAT TACCCTCAGT GACCTGTACT GCTACCAGAA CACCGAACCG
CCGAAACTGC GGGAACGGAT CACCGACATC GACCTCGTCG ACGACATCGA CGACATCGAC
CTCGAAGCGC CTCGAGAAAT CTTCCTTGAC GACCACGAGG ACCGCGACCA GATCCGGAAA
GCCTACGCCT CGTGGAGCGC CCAGTGGATG AAATGGGCGG AACGTGAACG CGAAACCGCG
GAAGCCGTCC GGCACTACGA GACTCTCTAC CGCATGCGCG AGGAGATGGA AGACCTCGGA
GAGTCGTACG AACTCGTGCT CGGCTTCGGC TACCTGACCT GGAAGTCCGA CGGGAAACCA
GTCGGCCGCC ACCTGGTGAC CCGGAAAATG GTCATCACCC TCGACGACAC CGGCGCCCTC
ACCCTCGCAC CCGACCCGGA AACCCCCGGA CTCGTCCTCG AAGAAGACAT GCTCGACCCC
GACCAGCGGG TCAGCGAAGA AGTCCGGGAA AGCATCACCG CAGAACTCGA CCAGGGCGCC
GCCTACGAAG GGGTGGAAGG CCTCGAACAC CTCCACACCG CCCTCCAAAA ATGGAGCATC
GAAGCGGCAG CGGACGCCCA CTACAGCGAC AGCCTCACCC GCCACGCCGA CCAAGGCACC
GAAGCTCCGC GCATCAGCTT CGCACCCGCC CTCATCCTGC GGGAACGCCC CCGGGACAAC
CAGCTCAAAG CCCTGCGGGA AATCACCAAG CGCCTAGAAA CGTGCGAAGA CCTCACCCCG
CTGCTGCGGT TCCTCACCGG AGCTGACGAC GACCGCAGCA GCCACTCCCT CGCAGACGTC
GACGACGAAG ACAAGCGCGC TACCCCGGCC CGCGAACCCT ACTTCGCGCT TCCCTCCAAC
CAGGAGCAGC GCTCCATCGC GGAACGACTC GACCAGAGCC ACCTCGTCGT CGTCCAAGGA
CCGCCCGGCA CCGGGAAGAC CCACACCATC GCCAACCTGG TCACTGACCT GCTCGCCCAG
GGAAAGAAAG TGCTGATCAC CAGCCACACC GCCCGGGCCC TGCGCGTCCT CAAAGAAAAA
CTCCCCGAAG AAATCCAAGC CCTGTGCGTG AGCAGGACCG GTGACGGGGT CGAAGCCCAG
GAAGAACTCG AAAAATCCGT TCGCGCCATC CTGGAGCGGC GCTCCGACTT CTCCCCGAAA
CAGTCGAAGA AAGAAATCCG CCGCCTCGAA GAACACTTGG ACAAGACACG CCGCGAACGG
GCAGAAGTAC TGCGGCGGCT CCGCGAAATC CGGGAACAAG AGACCTACCA CTTCTCCCCG
GAAATCGGCG ACTACCAGGG CTCACTCCAA GACATCGCGG AGCGTCTCGC CGCAGAAGAA
CCCCGATACC GGTGGATCGG CACCGTCAGC CAACCGCAGC CCGCCCTGAC CGCCGCCGAC
GCCCTCGCCC TGCTGCGCGC CGCCCGCAAC TACACCCCCG AACAGCGGAA GCGGGCTGCT
GACGTGCCTG CAGCCGACCA GCTTCCCACC CCCACCGAAT TCCGCGACGC CGTCCACAAG
ATCACCGAAG CGGAGAAGGC CGCTCAGGCT GCCGAAGGCC TGTGGGAAGG CGAAGCCGAC
GCCGCCATCC GCAGCCTGTC CCCGGAACGC TGCGCGGACA TTACTGCGGC AGTGGAAGCC
TTCGTAGCAT CCCGCGACAT CACGGCACGG CTCAGCGACC GCTGGCAGCA GGCCAGAAAC
GACGTGCTTG CCGGTCGGGA CCGCAGAATC CGGGAACAGC ACGCGCAGAT CGAACAAGCG
ATTGCAGCCG CGGAACAGAA AACCGCGGAA GTCGGCGACG CACGCATCAC CGGCCTCGAC
ACCTTCCCCC TCGACAAAGC CGCAGAATAT GCGGTCCGCC TCCACGACGG GCTCGCCGCA
GGCGAGCAAT TGCGCGGCCT GTTCGGCATG CGCACCCGGC TCGGCAAAGA AGTCCGGGAA
TTCGTGGAAA CCGTGCGCGT CGACGGCAAA GAACCCACCA CCGCTGACAC AGCGGCCCTC
GTCCGCGCCC GCGTCGAAGC CGAACAACTC CTGGCGGAAA CCGAAGAAGA ATGGTTGCCC
CAGCAGGCGG CCGGCAACGC GTGGAAGAAC CCCCGCTCCC GGATCGCGGC CCTCCGCGAC
GACCTCGACG GGCTCGCCCA GCTCGTGCAC CTGGCAGACA CCCGCGCACG CGTCGCCACC
GAGACCGCGA CCGTTCCCGG ACTCGCTGTG CTCGACTGGG CTGATCCCAC CGCAGTCGAC
ACTGTGCGCC TGCTGCTCAC CGCAGCCACC GCGGAACACG CCTCCAGCCC TGCCCGCCAG
CTCGTCGACC GCGCCCTCAC GGAAATCCAG CACTGGGAAG AACGCGGAGT GGTGTCCGAC
GACCTCCGGC AGGCCCAGCT CGCCTTGGAA AAACTCGACC CGGACGCCTA CGAACACGCC
TGCGCGTCCC TCGCCGAGAC CCGCGCTGCG GCACAAGCCC GCCAGGCCTA CCAGGATGCG
TACGCGACCG TTGACGAAGC CCACCCCACG CTGGCACGGG CCATCGCCGA AACCTACGAC
GACACCGTCT GGGACGAACG GCTCCCCGAA CTAGAGAAAG CGTGGGCGTG GTCGGCGTGG
AACACACGGC TCGCTGAACT CACCGACCCG GAAGCGGAAG ACCGCTGCCG CGCCAAACTC
AGCGAAGCCG ACAGCGAGAT CCGCACCACC ATGCGGAGGC TCGCCGCTGC TCTCGCCTGG
GACTCGTGCC TGCGGCGCCT CACCCAAGGC CAAGAAGTCG CGCTCCGCTC CTACCAGCAG
AGCGTCCGCA AAATCGGCAA AGGAACCGGG AAATACGCTC CCCGCTACCA GCGGCAAGCC
CAAGAAAGCC TCCGCGAATG CCGCCCCGCT GTCCCGGCCT GGATCATGCC CATGTACCAG
GTCGTCGCCA CCATCCCCAT GGACACGCCC CGCATCTTCG ATGTGGTGAT CATCGACGAG
GCGAGCCAGT CCGGGCCGGA GGCGATGCTG CTCGCCTGGA TCGCCGACCG GATCGTCGTC
GTCGGTGACG ACAAGCAGGT CAGCCCGGCC AATGTGGGAC TCGACCGGGA ACAGTTGTTC
CGGCTGCAGG AACGGCTGCT CGCCGACTTG TCGCCCTCGC GGCGCAACCT GTTCTCCCCC
GACCGGAGCT TCTTCGACAT CACCTCCGGG CTTGCGGGCG GCCCCGGGCA GCTCATGCTC
AAAGAGCACT TCCGCTGCAT GCCCGAAATC ATCGGCTTCT CCAACGAACT GTGCTACCAG
GGCCAGTTGC AGCCGCTGCG GCAATACGGC GCGGACCGTC TCCCCCCGCT CAAAACCGTC
TACGTGCCGG GCGTCGTGGA AGGAAGCGGG CAGCGCCAGA TCAACCGGCT CGAAGCGGAA
CGCCTCGTGG GGCAGATCAT CGCCTGCTGC AACGACCCCG CCTACGAGGG GCGCAGCATG
GGCGTCATCA CCCTGCTCGG TCACGCCCAG CAGACCCTGA TCGAAGACCT GCTCGCCGAA
CGGCTCCCCT TCGACGAACG CAGTGAACGG CGTATCCGCG TCGGCAGCCC GGCCGCGTTC
CAAGGCGACG AACGAGACGT GATCTTCATC AGCATGGTCG TCAGCCGGGA AGGCACCGAC
GGGCCGCGCC GCCTGAGCCA CTTCAGCGCG GAAGGGAACA AGCAGGCCAT TAACGTCGCG
GCGTCGCGGG CCCGAGACCA AGTGTGGGTG TTCCACAGTG TTTCCATCTC CGACCTGGGA
CAGAACGACC TGCGCCGCGC CTACCTGGAA TACCTGAACC GTCCGCTCCA CCTGCACGAC
GGCACCGGGA TCGGGGACGT GTCCCCCGAC GTCCGCCAAG AACCGTTCGA CAGCCTCTTC
GAACAGCGCG TGTTCCTCGC CCTGCGCGAC CGGGGCTACC GCGTTTACCC CCAATACCAG
GTCGGCCGCT ACCGCATCGA CTTGGTCGTT GAAGGCGGCA GCCGCCGCCT CGCGGTGGAA
TGCGACGGGG ACGCCTACCA CAACGAAGAA AACGCGGCTG AAGACGCCGC CCGGCAGCGG
GAACTCGAAA GAGTCGGCTG GACTTTCGTG CGGATCCGCG GCAGCCGGTT CTTCCGCGAC
CCTGAAGCCG CGCTGCAACC CCTGTGGCAG CGGTTGGCGG AACTGGACAT CCGGCCCATG
ACCCTGCCCG CGGAGACAGG CAGCGGAATG TAG
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| Protein sequence | MGAETARQDT EIARRIFRFL AEAEQTRLRP IRTLSSAHRK LWFSELPTGS DYVASGLLDP
DQKAWLRIKR IHQQEPPAVP EVLEPWITLS DLYCYQNTEP PKLRERITDI DLVDDIDDID
LEAPREIFLD DHEDRDQIRK AYASWSAQWM KWAERERETA EAVRHYETLY RMREEMEDLG
ESYELVLGFG YLTWKSDGKP VGRHLVTRKM VITLDDTGAL TLAPDPETPG LVLEEDMLDP
DQRVSEEVRE SITAELDQGA AYEGVEGLEH LHTALQKWSI EAAADAHYSD SLTRHADQGT
EAPRISFAPA LILRERPRDN QLKALREITK RLETCEDLTP LLRFLTGADD DRSSHSLADV
DDEDKRATPA REPYFALPSN QEQRSIAERL DQSHLVVVQG PPGTGKTHTI ANLVTDLLAQ
GKKVLITSHT ARALRVLKEK LPEEIQALCV SRTGDGVEAQ EELEKSVRAI LERRSDFSPK
QSKKEIRRLE EHLDKTRRER AEVLRRLREI REQETYHFSP EIGDYQGSLQ DIAERLAAEE
PRYRWIGTVS QPQPALTAAD ALALLRAARN YTPEQRKRAA DVPAADQLPT PTEFRDAVHK
ITEAEKAAQA AEGLWEGEAD AAIRSLSPER CADITAAVEA FVASRDITAR LSDRWQQARN
DVLAGRDRRI REQHAQIEQA IAAAEQKTAE VGDARITGLD TFPLDKAAEY AVRLHDGLAA
GEQLRGLFGM RTRLGKEVRE FVETVRVDGK EPTTADTAAL VRARVEAEQL LAETEEEWLP
QQAAGNAWKN PRSRIAALRD DLDGLAQLVH LADTRARVAT ETATVPGLAV LDWADPTAVD
TVRLLLTAAT AEHASSPARQ LVDRALTEIQ HWEERGVVSD DLRQAQLALE KLDPDAYEHA
CASLAETRAA AQARQAYQDA YATVDEAHPT LARAIAETYD DTVWDERLPE LEKAWAWSAW
NTRLAELTDP EAEDRCRAKL SEADSEIRTT MRRLAAALAW DSCLRRLTQG QEVALRSYQQ
SVRKIGKGTG KYAPRYQRQA QESLRECRPA VPAWIMPMYQ VVATIPMDTP RIFDVVIIDE
ASQSGPEAML LAWIADRIVV VGDDKQVSPA NVGLDREQLF RLQERLLADL SPSRRNLFSP
DRSFFDITSG LAGGPGQLML KEHFRCMPEI IGFSNELCYQ GQLQPLRQYG ADRLPPLKTV
YVPGVVEGSG QRQINRLEAE RLVGQIIACC NDPAYEGRSM GVITLLGHAQ QTLIEDLLAE
RLPFDERSER RIRVGSPAAF QGDERDVIFI SMVVSREGTD GPRRLSHFSA EGNKQAINVA
ASRARDQVWV FHSVSISDLG QNDLRRAYLE YLNRPLHLHD GTGIGDVSPD VRQEPFDSLF
EQRVFLALRD RGYRVYPQYQ VGRYRIDLVV EGGSRRLAVE CDGDAYHNEE NAAEDAARQR
ELERVGWTFV RIRGSRFFRD PEAALQPLWQ RLAELDIRPM TLPAETGSGM
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