| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0689 |
|---|
| Symbol | |
|---|
| ID | 3580532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 793738 |
|---|
| End bp | 794544 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637684382 |
|---|
| Product | putative hydrolase |
|---|
| Protein accession | YP_288750 |
|---|
| Protein GI | 72161093 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGGG TGGCCGTCGC ACAGTTCGCA CCGGGAATGG ACAAGCAGGC GAACCTGCGC
CGGGCTGTCG AACTGGTCCG CGCCGCCGTC GACCAGGGGG CGCGTCTCGT CGTGCTCCCC
GAGTATGCGA TGTTCACCGC CCCCGCCACC GACCACCGGT TCGTGGCCGC TGCGGAACCC
TTGGACGGCC GCTACGTGTC CGGGCTGCGG GACCTGGCGC GCGACTGCGG CGTGTACCTC
GTGGCCGGGG TCAACGAGGC GGTAGACGAT CCGGAACGGT TCGCCAACAC GACCGTGGCT
GTAGGCCCGG ACGGGGCGCT CCTCGTCTGC TACCGCAAAC TGCACTTGTA CGACGCTTTC
GGCTTCACCG AGTCCGCGGT GGTCCGGCCC GGGGAGATCA CCGATCCTGC GGTGTTCACC
GTCGACGGGC TCACCTTCGG CGTGCAGACC TGTTACGACC TGCGGTTCCC CGAAGTCACC
CGCAGGCTGG CCGACGCGGG CGCCCACGCT GTCGTGCTCG GCGCGGAATG GGTGCCGGGC
CCGGAGAAGA AAGAGCACTG GAAGCTGCTG GTGCGCGCCC GGGCCGTGGA GAACACCCTC
TACGTTGCTG CCGCCGGGCA GACCGCGCCG ATGGGGTCCG GGCACAGCAT GGTGGCCGAC
CCCATGGGAG TGGTGGTGGC GTCCCTCGCC GACGACGAGG GGGTCGCGGT CGCCGCAGTG
GACCCGGCCC GGGTCGCGGA AGTCCGCGCA CTCAACCCGG TGCTGGAGCT TCGGCGTTTC
ACCGTGGCGC CGAAATACCC CGTGTGA
|
|---|
| Protein sequence | MVGVAVAQFA PGMDKQANLR RAVELVRAAV DQGARLVVLP EYAMFTAPAT DHRFVAAAEP
LDGRYVSGLR DLARDCGVYL VAGVNEAVDD PERFANTTVA VGPDGALLVC YRKLHLYDAF
GFTESAVVRP GEITDPAVFT VDGLTFGVQT CYDLRFPEVT RRLADAGAHA VVLGAEWVPG
PEKKEHWKLL VRARAVENTL YVAAAGQTAP MGSGHSMVAD PMGVVVASLA DDEGVAVAAV
DPARVAEVRA LNPVLELRRF TVAPKYPV
|
|---|
| |