Gene Tfu_0651 details

Gene Information

• Locus tag: Tfu_0651
• Symbol: rnc
• ID: 3581430
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 753798
• End bp: 754520
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637684344
• Product: ribonuclease III
• Protein accession: YP_288712
• Protein GI: 72161055
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAACGC AGCTTTCCCC TGCCGAAGTC CGTGAGTTCC AGGAGACTGT CGGGGTCGAG 
ATCGCTCCCG ACATTCTCAC CCGCGCCCTC ACCCACCGCT CCTACGCCTA CGAGAACGGC 
GGTCTTCCCA CCAACGAGCG GTTGGAGTTC CTGGGCGACT CAGTGCTCGG CCTCGTGGTC 
ACCGACACCC TCTACCGCAC CCACCCGGAC CTGTCCGAAG GGCAACTGGC CAAGCTGCGC 
GCCGCGGTGG TCAACATGCG GGCGCTGGCC GATGTGGCCC GCGAACTGGG GATCGGCCGC 
TATGTGCGAC TGGGACGCGG CGAGGAGGCC ACGGGCGGCC GCGACAAGTC GTCGATCCTC 
GCCGACACGT TGGAAGCCTT GATCGGGGCC GTCTACCTGG ACCGCGGACT GGACGAGGCG 
TCTGAGCTGG TCCACCGGCT GTTCGACCCG CTGATCGCCC GGGCTTCCGG CTTGGGCGCG 
GGACTGGACT GGAAGACGTC CCTGCAGGAG CTCACCGCGG CTGAACTGCT CGGTGTTCCC 
GAATACGTGG TGGAAGAGAG CGGCCCGGAC CACCAGAAGA CGTTCCGCGC CACGGTGCGG 
GTCGCCGGGC AGACCTACGG CTCGGGAGAG GGCCGCAGCA AGAAGGAAGC AGAGCAGCAG 
GCCGCGGAAT CCGCGTGGAA GGCGATCCGC GCCGCCACCG AGAAAGCCAA GCAGGAGAGC 
TGA 

 

Protein sequence

MGTQLSPAEV REFQETVGVE IAPDILTRAL THRSYAYENG GLPTNERLEF LGDSVLGLVV 
TDTLYRTHPD LSEGQLAKLR AAVVNMRALA DVARELGIGR YVRLGRGEEA TGGRDKSSIL 
ADTLEALIGA VYLDRGLDEA SELVHRLFDP LIARASGLGA GLDWKTSLQE LTAAELLGVP 
EYVVEESGPD HQKTFRATVR VAGQTYGSGE GRSKKEAEQQ AAESAWKAIR AATEKAKQES