| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0646 |
|---|
| Symbol | |
|---|
| ID | 3581425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 748983 |
|---|
| End bp | 751184 |
|---|
| Gene Length | 2202 bp |
|---|
| Protein Length | 733 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637684339 |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_288707 |
|---|
| Protein GI | 72161050 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT TGACCGAGTC GCTGCGCGTC GTCGGGGACC GCACCGCGAA GGTCCTGGCT
TCCGCACTGG GCTTGCACAC CGTGGGAGAC CTGCTGCGCC ACTACCCCCG GCGCTACGAC
CGCCGCGGCG AGCTCACCGA CCTGGACGGG CTGGTCGAAG GGGAACAGGT CACTGTCCTT
GCCGAAGTCC TCACCTGCAC GGTCCGCCCG ATGCGCCAGC GGCGCGGCTC CATCCTCGAA
GTCGTCGTCA CCGACGGCCG CGGCCGGCTC TCCCTGCTCT TCTTCCACCG GGTCGGCTGG
CACCGCGACC GGCTCCTGCC GGGCCGGCGC GGGCTGTTCG CCGGAAAAGT CTCCGTCTAC
CGGGGGCGCC GCCAACTCGC CCACCCCGAA TACGAGCTGT TCGAGTCCGA CGACGCGATC
CAGGAACGGG CCCGCACCTA CGCGGACACG CTCATCCCCA TCTATCCGGC GACCGAAAAG
ATCACTTCGT GGAAGATCGC CAAAGCCGTG GCCACGGTCC TCGACATCCT GGGGGACCTC
CCCGACCCGC TGCCCGCCGA CCTCCGCGCC CGGCACGGCC TGGTGAGCCT GTCCGAGGCC
TACCGGCTCA TCCACACCCC GAAAGACTGG GATGATGTGC GCGCGGCACG GAAGCGGCTG
AAATGGGACG AGGCGTTCGT CATCCAGGTG GCGCTCGCCC AGCGGCGGCG TACCGCCCAG
CGGCAGCCCG CCCAGCCCCG CCCCCGCATC TCCGGCGGGA TCCTCGACGC CTTCGACGCG
AACCTGCCGT TCACGCTCAC CGACGGACAG CGCGAGGTGG GCGAGGTGAT CTCCGCCGAC
CTCGCTTCCG ACCACCCCAT GCACCGCCTG CTCCAAGGCG ATGTCGGCGC AGGCAAGACC
CTGGTCGCCC TGCGCGCCAT GCTCCAAGTG GTGGATGCGG GCGGGCAGGC GGCTCTCCTC
GCCCCCACCG AGGTGCTGGC CCAGCAGCAC CACCGCTCGA TCACTGAGAT GCTCGGCCCC
CTGGCCCGGG CTGGCCAGCT CGACGGCGCG GAACAGGCGA CCCGCGTCGC CCTGCTCACC
GGCTCGCTCG GCGCGGCCGC CCGCCGGGAA GCGCTGCTGG ACGCAGCCTC CGGCCGGGCC
GGCATCGTCA TCGGCACCCA CGCCCTGCTC CAAGAACAGG TCACGTTTGC CGACCTCGGC
CTGGTCGTGA TCGACGAGCA GCACCGTTTC GGCGTAGAAC AGCGCGACGC GCTGCGCGAC
AAGTCCACCC GTGGCCGGCC GCACGTGCTC GTCATGACCG CGACCCCGAT TCCGCGCACC
GTGGCGATGA CGGTCTACGG CGACCTCGAC GTGGTGGCGC TCCGGCAGCT CCCCGCCGGG
CGGTCCCCGA TCGCTACCCA CGTGGTCCCG TCCCGCGACA AACCGCACTA CCTGGCCCGG
GCCTGGGAGC GCATCCGCGA AGAAGTCGCG CAGGGCCGCC AGGCCTATAT CGTCTGCCCC
CGGATCGGCG GGGAAGCCGA AGACCCCGAG GAGAACGGAC GGCTCTTCGC CGAACCGGAC
GGCGGGGAGA CCGCGGGGCG GCGCGCCCCG CTCGCCGTTG TCGACCTGCT CGCCGAAGTC
GAGCAGGGGC CGCTTGCAGG CCTGCGGCTG GCCGCGCTGC ACGGCCGGCT GGCCCCTGAC
GAGAAGGACA AGGTCATGCG GGCCTTCGCC GCGGGCGAAA TCGACGTGCT CGTGGCGACC
ACCGTGGTCG AAGTCGGCGT GAATGTGCCC AACGCCACTG TGATGATGAT CATGGACGCG
GACCGGTTCG GGGTCTCCCA ACTGCACCAG TTGCGCGGCC GGGTCGGCCG GGGCAGCCTG
CCCGGACTGT GTCTGCTGGT CACCGAGGCT GAAGAGGGCA GCCCGGCCCG GCGGCGCCTG
GACGCGGTGG CGTCCACCAC CGACGGGTTC GCCCTGTCCC GGCTGGACTT GGAGCAGCGC
CGCGAAGGCG ACATCCTCGG CGTGGCCCAG TCCGGCCGCA GCGGCACCCT GCGGCTGCTC
ACCATCACCC ACGAGCAGGA CGAGGAGCTG ATCGGCCAGG CCCGTGCGGA GGCCACCGCC
CTGGTGGACG CCGACCCGGA GCTGTCCGAC CACCCCGTGC TGGCCCAGGC CCTCACCGAA
CTGCTCGGCG ACGACCGCGC AGAGTACCTA GAGAAAGCCT GA
|
|---|
| Protein sequence | MTDLTESLRV VGDRTAKVLA SALGLHTVGD LLRHYPRRYD RRGELTDLDG LVEGEQVTVL
AEVLTCTVRP MRQRRGSILE VVVTDGRGRL SLLFFHRVGW HRDRLLPGRR GLFAGKVSVY
RGRRQLAHPE YELFESDDAI QERARTYADT LIPIYPATEK ITSWKIAKAV ATVLDILGDL
PDPLPADLRA RHGLVSLSEA YRLIHTPKDW DDVRAARKRL KWDEAFVIQV ALAQRRRTAQ
RQPAQPRPRI SGGILDAFDA NLPFTLTDGQ REVGEVISAD LASDHPMHRL LQGDVGAGKT
LVALRAMLQV VDAGGQAALL APTEVLAQQH HRSITEMLGP LARAGQLDGA EQATRVALLT
GSLGAAARRE ALLDAASGRA GIVIGTHALL QEQVTFADLG LVVIDEQHRF GVEQRDALRD
KSTRGRPHVL VMTATPIPRT VAMTVYGDLD VVALRQLPAG RSPIATHVVP SRDKPHYLAR
AWERIREEVA QGRQAYIVCP RIGGEAEDPE ENGRLFAEPD GGETAGRRAP LAVVDLLAEV
EQGPLAGLRL AALHGRLAPD EKDKVMRAFA AGEIDVLVAT TVVEVGVNVP NATVMMIMDA
DRFGVSQLHQ LRGRVGRGSL PGLCLLVTEA EEGSPARRRL DAVASTTDGF ALSRLDLEQR
REGDILGVAQ SGRSGTLRLL TITHEQDEEL IGQARAEATA LVDADPELSD HPVLAQALTE
LLGDDRAEYL EKA
|
|---|
| |