| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0633 |
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| Symbol | ddl |
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| ID | 3581412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 735585 |
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| End bp | 736700 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637684326 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_288694 |
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| Protein GI | 72161037 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTGAGC AGCGAAAGAT CCGGGTTGCC GTCATCTTCG GCGGACGCAG TTCCGAACAC
GAGATCTCCT GCGTGACCGC GGGAAGCGTG ATGTCCGCCA TCGATACCGA CCGCTACGAC
ATCCTGCCCA TCGGAATCAC GCGGGACGGT GACTGGAGGC TGGTCACCGC GGATCCCAGC
GAGTTGGCAA TCGTTGACGG CAAGCTTCCG GCCGTGCCCG ACAGCGGCGC GCGACTGGCC
CTGGCCCTCG ACACGCCCGG CGCTTTCCTG GAGGTCGCCC CGGACAGCCT GCCGCGGCTC
GTCGGCCAGG TCGACGTGGT GCTGCCGCTG CTGCACGGCC CCTTCGGGGA GGACGGCACC
ATCCAAGGGC TGCTGGAACT CGCCGGAGTC CGCTACGTGG GTGCCGGAGT GTTCGCCAGC
GCCGCTTCCA TGGACAAGGT CTTCATGAAG GCGCTGCTCA CCGCGCAGGG CCTGAAGACC
GGCCCGTATC TTGCGGTCAG TGACCGGGCG TGGACCCGCC ACCGCAAACG CGTGCTGGAC
AACATCGCCG CGCTCGGCGG GGTGGTGTTC GTCAAGCCTG CCCGCGCCGG GTCCAGCATC
GGCATCAGCC GGGTGCCCGA CGCCACCGAC ACCGCCGCGG TCACCGAAGC CATCGAGGCC
GCACGCGCCC ACGACCCGAA GGTCATCGTG GAAGCCGGGA TCCAGGGCCG GGAGATCGAA
TGCGGCGTGT TGGAGAGCCT GGACGGCGGG GAGCCTGACG TGTCGCTGCC CGCGGAAATC
CACGTGGCCG AGGGGTACGA CTTCTACGAC TTCGAGGCCA AGTACCTCTC CAACAGCGGT
CTGAGCATCC CCGCGGACCT GCCTGACGAG GTGACCCAGC GGGTGCGGAA ACTCGCCGCG
GAAGCGTTCG ACGCGCTGGG CTGCGAAGGA CTGGCCCGCG TGGACTTCTT CTACGGCGAC
GACGGGGAGA TCTACATCAA CGAGATCAAC ACCATGCCGG GCTTCACGCC GGCTTCGGCG
TTCCCGCAGA TGTGGGCGGC GAGCGGTCTG GACTACCCGG CGCTGGTGGA CCGGCTGATC
CGCACCGCGC TCGTGCGTCG CACCGGCCTG CGTTAG
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| Protein sequence | MGEQRKIRVA VIFGGRSSEH EISCVTAGSV MSAIDTDRYD ILPIGITRDG DWRLVTADPS
ELAIVDGKLP AVPDSGARLA LALDTPGAFL EVAPDSLPRL VGQVDVVLPL LHGPFGEDGT
IQGLLELAGV RYVGAGVFAS AASMDKVFMK ALLTAQGLKT GPYLAVSDRA WTRHRKRVLD
NIAALGGVVF VKPARAGSSI GISRVPDATD TAAVTEAIEA ARAHDPKVIV EAGIQGREIE
CGVLESLDGG EPDVSLPAEI HVAEGYDFYD FEAKYLSNSG LSIPADLPDE VTQRVRKLAA
EAFDALGCEG LARVDFFYGD DGEIYINEIN TMPGFTPASA FPQMWAASGL DYPALVDRLI
RTALVRRTGL R
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