| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0620 |
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| Symbol | |
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| ID | 3580649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 719475 |
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| End bp | 721265 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637684310 |
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| Product | cellobiohydrolase |
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| Protein accession | YP_288681 |
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| Protein GI | 72161024 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.250178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG TTCGTGCCAC GAACAGACGT TCGTGGATGC GGCGCGGCCT GGCAGCCGCC
TCTGGACTGG CGCTTGGCGC CTCCATGGTG GCGTTCGCTG CTCCGGCCAA CGCCGCCGGC
TGCTCGGTGG ACTACACGGT CAACTCCTGG GGTACCGGGT TCACCGCCAA CGTCACCATC
ACCAACCTCG GCAGTGCGAT CAACGGCTGG ACCCTGGAGT GGGACTTCCC CGGCAACCAG
CAGGTGACCA ACCTGTGGAA CGGGACCTAC ACCCAGTCCG GGCAGCACGT GTCGGTCAGC
AACGCCCCGT ACAACGCCTC CATCCCGGCC AACGGAACGG TTGAGTTCGG GTTCAACGGC
TCCTACTCGG GCAGCAACGA CATCCCCTCC TCCTTCAAGC TGAACGGGGT TACCTGCGAC
GGCTCGGACG ACCCCGACCC CGAGCCCAGC CCCTCCCCCA GCCCTTCCCC CAGCCCCACA
GACCCGGATG AGCCGGGCGG CCCGACCAAC CCGCCCACCA ACCCCGGCGA GAAGGTCGAC
AACCCGTTCG AGGGCGCCAA GCTGTACGTG AACCCGGTCT GGTCGGCCAA GGCCGCCGCT
GAGCCGGGCG GTTCCGCGGT CGCCAACGAG TCCACCGCTG TCTGGCTGGA CCGTATCGGC
GCCATCGAGG GCAACGACAG CCCGACCACC GGCTCCATGG GTCTGCGCGA CCACCTGGAG
GAGGCCGTCC GCCAGTCCGG TGGCGACCCG CTGACCATCC AGGTCGTCAT CTACAACCTG
CCCGGCCGCG ACTGCGCCGC GCTGGCCTCC AACGGTGAGC TGGGTCCCGA TGAACTCGAC
CGCTACAAGA GCGAGTACAT CGACCCGATC GCCGACATCA TGTGGGACTT CGCAGACTAC
GAGAACCTGC GGATCGTCGC CATCATCGAG ATCGACTCCC TGCCCAACCT CGTCACCAAC
GTGGGCGGGA ACGGCGGCAC CGAGCTCTGC GCCTACATGA AGCAGAACGG CGGCTACGTC
AACGGTGTCG GCTACGCCCT CCGCAAGCTG GGCGAGATCC CGAACGTCTA CAACTACATC
GACGCCGCCC ACCACGGCTG GATCGGCTGG GACTCCAACT TCGGCCCCTC GGTGGACATC
TTCTACGAGG CCGCCAACGC CTCCGGCTCC ACCGTGGACT ACGTGCACGG CTTCATCTCC
AACACGGCCA ACTACTCGGC CACTGTGGAG CCGTACCTGG ACGTCAACGG CACCGTTAAC
GGCCAGCTCA TCCGCCAGTC CAAGTGGGTT GACTGGAACC AGTACGTCGA CGAGCTCTCC
TTCGTCCAGG ACCTGCGTCA GGCCCTGATC GCCAAGGGCT TCCGGTCCGA CATCGGTATG
CTCATCGACA CCTCCCGCAA CGGCTGGGGT GGCCCGAACC GTCCGACCGG ACCGAGCTCC
TCCACCGACC TCAACACCTA CGTTGACGAG AGCCGTATCG ACCGCCGTAT CCACCCCGGT
AACTGGTGCA ACCAGGCCGG TGCGGGCCTC GGCGAGCGGC CCACGGTCAA CCCGGCTCCC
GGTGTTGACG CCTACGTCTG GGTGAAGCCC CCGGGTGAGT CCGACGGCGC CAGCGAGGAG
ATCCCGAACG ACGAGGGCAA GGGCTTCGAC CGCATGTGCG ACCCGACCTA CCAGGGCAAC
GCCCGCAACG GCAACAACCC CTCGGGTGCG CTGCCCAACG CCCCCATCTC CGGCCACTGG
TTCTCTGCCC AGTTCCGCGA GCTGCTGGCC AACGCCTACC CGCCTCTGTA A
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| Protein sequence | MSKVRATNRR SWMRRGLAAA SGLALGASMV AFAAPANAAG CSVDYTVNSW GTGFTANVTI
TNLGSAINGW TLEWDFPGNQ QVTNLWNGTY TQSGQHVSVS NAPYNASIPA NGTVEFGFNG
SYSGSNDIPS SFKLNGVTCD GSDDPDPEPS PSPSPSPSPT DPDEPGGPTN PPTNPGEKVD
NPFEGAKLYV NPVWSAKAAA EPGGSAVANE STAVWLDRIG AIEGNDSPTT GSMGLRDHLE
EAVRQSGGDP LTIQVVIYNL PGRDCAALAS NGELGPDELD RYKSEYIDPI ADIMWDFADY
ENLRIVAIIE IDSLPNLVTN VGGNGGTELC AYMKQNGGYV NGVGYALRKL GEIPNVYNYI
DAAHHGWIGW DSNFGPSVDI FYEAANASGS TVDYVHGFIS NTANYSATVE PYLDVNGTVN
GQLIRQSKWV DWNQYVDELS FVQDLRQALI AKGFRSDIGM LIDTSRNGWG GPNRPTGPSS
STDLNTYVDE SRIDRRIHPG NWCNQAGAGL GERPTVNPAP GVDAYVWVKP PGESDGASEE
IPNDEGKGFD RMCDPTYQGN ARNGNNPSGA LPNAPISGHW FSAQFRELLA NAYPPL
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