| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0609 |
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| Symbol | gatB |
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| ID | 3581536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 702629 |
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| End bp | 704182 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684299 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_288670 |
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| Protein GI | 72161013 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAGCG CGGTGACGAG TGACCACTCC GCCAAGGGCG GTGCTACGGC GCTGATGCCC
TACGACGAGG TACTGCGCGG GTACGAGCCG GTACTGGGAT TGGAGACCCA CGTCGAGCTG
GGTACCCGCT CGAAGATGTT CTGCTCCTGC GCCACTACTT TCGGCGCCGA ACCGAACACC
CAGGTGTGCC CGGTGTGCCT GGCGCTGCCG GGTGCGCTGC CGGTGGTCAA CAGCGCGGCA
GTGGAGAGCG CGATCCGGCT CGGTCTTGCG CTGAACTGCT CTATCGCCGA GTGGTGCCGG
TTTGCCCGGA AGAACTACTT CTATCCGGAC ATGCCGAAGA ACTACCAGAT CTCGCAGTAC
GACGAGCCGC TCTGCTACGA CGGGTACCTC GACGTCACGG TGGACACCCC GGAAGGGCCG
CGCGAGTTCC GGATCGGTAT CGAGCGCGTC CACATGGAGG AGGACACCGG TAAGACGTCG
CACGTGGGCG GGGCTGACGG CCGGATCCAC GGCGCCGAGT ACTCCACCGT CGACTACAAC
CGCGCGGGGA TTCCGCTGCT GGAGATCGTC ACCAAGCCGA TCGAGGACGC CGGGGAGTGG
GCTCCCCAGG TGGCCCGCGC CTATGTACGG GAGCTGCGTG ACCTGATCCG CGCCCTGGGG
ATCTCCGACG TGCGCATGGA GGAGGGTTCG CTCCGCTGCG ACGTCAACGT TTCGCTGAAG
CCGCGCGGGA GCACGGAGTG GGGCACCCGG ACTGAGACGA AGAACGTCAA CTCGCTGCGT
TCGATCGAGC GGGCGGTCCG CCACGAGATC GAACGGCAGG GCGGGGTCCT GTCCGCGGGC
GGCCGCGTCG TGCAGGAGAC CCGGCACTTC CAGGAGAGCA CGGGAACCAC TGTGGCGGGG
CGCAGCAAGG AGGAGGCGCA GGACTACCGC TACTTCCCCG ACCCTGACCT GGTGCCGGTC
GCGCCCGACC GCGAATGGGT GGAGCAGCTC CGCGCCACCC TGCCGGAACT GCCTTCCGCG
AAGCGGCGCC GGCTCAAGGC CGAATGGAAC CTGACCGACA AGGAGCTGCA GGACCTCGTC
AATGCGAACG CGGTCGACCT GGTCGAGCAG ACTGTTGCCG CGGGCGCTCC CCCGGCTGAG
GCGCGCAAGT GGTGGTTGAA CGACCTGTCG CGGCGGGCCA CGGAGACCGG TGTGGAGCTG
AGCGAGCTGC CGATCACCCC GGCCCAGGTC GCCCGGGTCG TGGAGCTGGT TGCCGAGGGG
TCGCTCACCA ACAAGCTGGC CCGGCAGGTG GTCGACGGGG TGCTCGCAGG AGAAGGCGAG
CCGGACGAGG TGGTGGAAGC CCGCGGGCTG CGGGTGGTCA GCGACGACGC TGCCCTGGGC
GCGATCGTCG ACCAGGCGAT CGCGAACAAC GCGGACGCCG CCGAGAAGGT CCGCAACGGC
AAGATCGCCG CGGTGGGCGC CCTGGTCGGT GCGGTCATGC GGGAGACCAA GGGCCAGGCG
GACGCGGGAC GGGCACGGCA GCTCATCCTG GAGCGGCTGG GGGTCTCGGG CTGA
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| Protein sequence | MGSAVTSDHS AKGGATALMP YDEVLRGYEP VLGLETHVEL GTRSKMFCSC ATTFGAEPNT
QVCPVCLALP GALPVVNSAA VESAIRLGLA LNCSIAEWCR FARKNYFYPD MPKNYQISQY
DEPLCYDGYL DVTVDTPEGP REFRIGIERV HMEEDTGKTS HVGGADGRIH GAEYSTVDYN
RAGIPLLEIV TKPIEDAGEW APQVARAYVR ELRDLIRALG ISDVRMEEGS LRCDVNVSLK
PRGSTEWGTR TETKNVNSLR SIERAVRHEI ERQGGVLSAG GRVVQETRHF QESTGTTVAG
RSKEEAQDYR YFPDPDLVPV APDREWVEQL RATLPELPSA KRRRLKAEWN LTDKELQDLV
NANAVDLVEQ TVAAGAPPAE ARKWWLNDLS RRATETGVEL SELPITPAQV ARVVELVAEG
SLTNKLARQV VDGVLAGEGE PDEVVEARGL RVVSDDAALG AIVDQAIANN ADAAEKVRNG
KIAAVGALVG AVMRETKGQA DAGRARQLIL ERLGVSG
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