Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0589 |
Symbol | |
ID | 3580163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 677103 |
End bp | 677879 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637684279 |
Product | ABC-type cobalt transport system |
Protein accession | YP_288650 |
Protein GI | 72160993 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0946935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACCTCA CCTCTGCCCC TGCGGGCCGC GCCGCACCCG GCAACGGACA GCCGGGCGTC CGGTCCTGGC TGCTCGGCAT CAACCCGGCC GCCAAACTGA TCGCGGCCTG TGTCATCTCC TTCGGCCTCA TCCCCGCCGT GGACCCGGTC ACCGGCGGGA TCGTCCTCGC CGTCACAGCC CTGCTGCTGC CGTTCAGCGG GATCAACCGG GCCACCCTGC TGGTGCTCAG CGTCCCGTTC TGCCTCATGG GGCTCTCCAC ATGGGTGGTC AACCTGCTCT ACGGCGAAGA AGGCCTGTGG GGGGCGTCCG GCGCGGCAGT GCGCATCCTC GCGATCGCCC TGCCGGGGAT GCTGGCCGCG GTCAGCAGCG ACGCCACTGA CCTTGCGGAC GCGCTCGTGC AGCGCCTCAA AGTCCCGGAG CGGCCTGCGA TGGGGGTGCT TGCCGCGCTC CGGCTGGTCC CGCTGCTGGC CGACCAGTGG CGTACCGTCA CCCTCGCCCG GAGGGCCCGC GGTCTGGAAG CCGGGCGCAA CCCGCTGGCC GCGCTCTCCA TCTTCTTCGG GAAGCTGTTC GCGCTGCTGG TCCGTGCGGT GCGCACCGGC ACGCTGCTGG CGACAGCAAT GGACGCCCGC GCGTTCGGCA CGGGGCCGCG GTCGCACGCC CGGGTCAGCC GGTGGCGTCT CGCTGACACG GTGCTCGTCG CGGCCAGTCT GCTGCTGCTT GCCGCCGCCT ACACGGTCTC CGCCCAGCTC GGCACGCTGC GGCTGCTGTT CACCTGA
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Protein sequence | MNLTSAPAGR AAPGNGQPGV RSWLLGINPA AKLIAACVIS FGLIPAVDPV TGGIVLAVTA LLLPFSGINR ATLLVLSVPF CLMGLSTWVV NLLYGEEGLW GASGAAVRIL AIALPGMLAA VSSDATDLAD ALVQRLKVPE RPAMGVLAAL RLVPLLADQW RTVTLARRAR GLEAGRNPLA ALSIFFGKLF ALLVRAVRTG TLLATAMDAR AFGTGPRSHA RVSRWRLADT VLVAASLLLL AAAYTVSAQL GTLRLLFT
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