Gene Tfu_0587 details

Gene Information

• Locus tag: Tfu_0587
• ID: 3580161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 674961
• End bp: 675563
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637684277
• Product: ABC transporter, permease protein
• Protein accession: YP_288648
• Protein GI: 72160991
• COG category: [S] Function unknown
• COG ID: [COG4721] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.0196696
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCCGG CCGAGCCGCA ACCCGGCCAG GATCGTCAAT CCCTCCTCCA CTGGCGCACC 
GTGGACATCG TGGTGGCTGC CGTCATCGGT GTCGCCGTGG GGATCGTCTT CTGGGTGTGG 
AGTGTCCTGT GGAACGCCAC CACGGGACTG TTCGCGTTCT TCCCTCCGGC CCAGGCCATT 
CTCTACGGCA TGTGGATGGT CCCCGGTGTC CTCGGCGGAC TCATCATCCG CAAACCCGGG 
GCCGCCGTGC TGACGTCGAT CGCCGCCGCC TCCCTGGAGA TGCTGCTGGG CACCGGGTGG 
GGCGTCTCGG TCCTCATCTC CGGCGCCCTG CAAGGACTGC TCAGTGAACT GGTCTTCCTC 
GCCTTCCGCT ACCGCAGCTG GGGCATGGGG GTGGCAGTCC TCGCGGGAGT GGCCGGCGGG 
ATCTCCCCCG CGATCCGGGA CAACCTCACC TACCATGTCA CCTGGCCCCT CAGCTACCAG 
GTCGTCTACG GGGTACTCGT CCTGATCAGC GCCGGCCTCA TCGCCGGGGC GGGCTCGCGT 
GTGCTCACCA CGCGCTTGGC CGCCGCCGGA GCGCTGTCCC CCTTCGCCTC GGCGCGGGGA 
TAG 

 

Protein sequence

MSPAEPQPGQ DRQSLLHWRT VDIVVAAVIG VAVGIVFWVW SVLWNATTGL FAFFPPAQAI 
LYGMWMVPGV LGGLIIRKPG AAVLTSIAAA SLEMLLGTGW GVSVLISGAL QGLLSELVFL 
AFRYRSWGMG VAVLAGVAGG ISPAIRDNLT YHVTWPLSYQ VVYGVLVLIS AGLIAGAGSR 
VLTTRLAAAG ALSPFASARG