| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0586 |
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| Symbol | |
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| ID | 3580160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 671844 |
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| End bp | 674465 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684276 |
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| Product | alpha-glucan phosphorylase |
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| Protein accession | YP_288647 |
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| Protein GI | 72160990 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.923216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGCTA TTCGTAGGTT TACCGTCCGT ACCGTTCTGC CTGACGAGCT CGCTGCATTG
TGCACCCTGG CCGCCAACCT GCGGTGGACG TGGCACGCCC CTACGCGCGC CGTATTCGCT
GCGGTGGAGC CCCGCCTCTG GGAAGCCGTG GGCCGGGACC CCATCCGGCT GCTCGGAGAA
GTCACCCCGG AACGGCTCCG GGAGCTCGCC GCCGACGCAG AGTTCCGCGC CCGGCTCGAC
GCAGCCGCCG CCGACCTCGA CCGCTACCTC ACCGCTCCAC TGTGGTACCA GCAGCTCACG
GACAGCTCCG ACACCCCGCC GCCGGCAGCG ATCGCCTACT TCTCCGCCGA ATACGGGCTC
GACGCCACCC TGCCCCAGTA CTCCGGCGGT CTGGGCATCC TCGCGGGAGA CCACCTGAAA
AGCGCCAGCG ACCTGGGCAT CCCCGTGATC GGCGTGGGAC TGCTCTACCG GCACGGCTAC
TTCTCCCAGA CCCTGTCGCC CGACGGATGG CAACTGGAGC GCTACCCCGA GATCGACCCG
CACTGCCTGC CGATGACCCG CCTGGAGGAC CGCGGCACCC CGGTGCGCAT CACCGTCGAC
CTTCCCGAGA ACCGCACGCT GACCGCGCAC GTCTGGATCG TGCGGGTGGG CCGCGTGCCG
CTGCTGCTGC TCGACACCTA CCACGACGAC AACGACCTCG ACCTGCGCGG TGTCACCGAC
CGCCTCTACG GCGGCGGCAC CGAGCAGCGG CTCCGCCAAG AACTGCTGCT CGGCATCGGC
GGACTGCGCG CGGTCCGCGC CTACTGCCTG CGCACCGGGT ATCCCGAGCC CGAGGTCTTC
CACATGAACG AAGGGCACGC GGGATTCCTC GGCCTGGAAC GGCTGCGCGA ATACATCGAG
ACCGCAGGAC TCGACTTCGA CCAGGCGCTG GAAGCCACCC GGTCCGGAAC CGTGTTCACC
ACCCACACCC CGGTGCCCGC CGGAATCGAC CGGTTCCCCA AGGAACTCGT GGAACGCCAC
TTCAGCGGCC CGGTGGCGCT GCCCGGGCTC CCCGTGGAAC GGGTGATGGC GCTCGGCGCC
GAAACCTATC CGGGCGGCGA CCCCAACGTG TTCAACATGG CTGTCATGGG TATGCGCCTC
GCCCAGCGGG TCAACGGCGT CAGCGCCCTG CACGGCGCGG TCAGCCGGGA GATGTTCGGT
GGACTGTGGC CGGGATTCGA CGTCGACGAA GTGCCCATCA CCTCCATCAC CAACGGCGTG
CACGCTGCGA CCTGGATGGC AGAAGAAGCG TGGGACGCGG CACAGGCCAT GGGCCTCGGC
CTGGAAGAGC TCGAAACCCC CGCAGGCTGG CAGCGGCTGG TGGAACGGGA CGCAGAAGAG
CTCTGGCGGA TGCGCCGCGC CCTGCGCGAA CGGCTGATCA TCGAGGCCCG CAAACGGCTC
CGCGCCTCCT GGCGGCAGCG GGGGGCCACC GACGCGGAAC TCGCCTGGAT CGACGAGGCA
CTCGACCCGG AGGTGCTCAC CGTCGGTTTC GCCCGCCGCG TGCCCTCCTA CAAACGGCTC
ACCTTGATGC TGCGCGACCC GGAACGCCTC ACCGCGCTCC TGCGCCACCC GGAACGCCCC
ATCCAGATCA TCATCGCGGG CAAAGCCCAC CCCGCTGATG AAGGCGGCAA ACGGCTCATC
CAGGAGATGG TGCGGTTCAG CGACGATCCT CGGGTGCGGG ACCGCATCGT CTTCCTGCCC
GACTACGACA TGGCGCTGGC CGCGCTCCTC GTGCAGGGCT GCGACGTGTG GCTGAACAAC
CCGCTGCGTC CCCTGGAAGC GTGCGGCACC TCAGGCATGA AGTCCGCGCT CAACGGCGGA
CTCAACCTGT CGATCCGCGA CGGCTGGTGG GACGAGTGGT TCGACGGCTC CAACGGGTGG
GCGATCCCCA CCGCGGACGG CGTCGACGAC CCGGACCGGC GGGACGACAT CGAAGCGGCA
GCCCTCTACG AGCTGTTCGA GGAGCAGGTC GCCCCCTTGT TCTACGAGCG GGACGACCAC
GGACTGCCCC GGCGGTGGCT GGAGACGGTC AAGCACACCA TGGTCTCCCT GGGACCGAAA
GTGCAGGCCA CCCGCATGGT CCGCGAATAC GTCGACCAGC TCTACCAGCC AGCCGCGCTC
GCCATGCGGC GGCTCGCCGC AGACAACTAC CGCGGAGCCC GGGAGCTCGC CGCCTGGAAA
CAGCGGGTGC AGCACGCCTG GCCGGGGGTG CGCATCGAAC ACGTCGAAAC GTCGATGAAC
GGGGACACCC CGCAGGTCGG CGGGGAACTG GAGGTGCGCG CCACCCTGGT CCTGGGCGGG
CTCGACCCGG ACGACGTGTG CGTGGAGGTC GTCCTGGGAC TCGTCAACGA CGACGACGAA
CTGATCAACC CGACCACGAC CGAACTCGTG CCGCTGCCCG CCTCGGACGT GGTCTACCCG
CTGGTGCGCT TCGGCGGGAC CGTCCCACTG GACCGCGCGG GCACGTGCGG GTACACGGTC
CGCATCCGCC CACGGCACCG GCTCCTCACC CATCCCGCAG AAGCGGGGAT GGCCGTGGTA
GCCGAACCCA CGATGGGTAT CGGCACCCTC GTGCCGCACT GA
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| Protein sequence | MKAIRRFTVR TVLPDELAAL CTLAANLRWT WHAPTRAVFA AVEPRLWEAV GRDPIRLLGE
VTPERLRELA ADAEFRARLD AAAADLDRYL TAPLWYQQLT DSSDTPPPAA IAYFSAEYGL
DATLPQYSGG LGILAGDHLK SASDLGIPVI GVGLLYRHGY FSQTLSPDGW QLERYPEIDP
HCLPMTRLED RGTPVRITVD LPENRTLTAH VWIVRVGRVP LLLLDTYHDD NDLDLRGVTD
RLYGGGTEQR LRQELLLGIG GLRAVRAYCL RTGYPEPEVF HMNEGHAGFL GLERLREYIE
TAGLDFDQAL EATRSGTVFT THTPVPAGID RFPKELVERH FSGPVALPGL PVERVMALGA
ETYPGGDPNV FNMAVMGMRL AQRVNGVSAL HGAVSREMFG GLWPGFDVDE VPITSITNGV
HAATWMAEEA WDAAQAMGLG LEELETPAGW QRLVERDAEE LWRMRRALRE RLIIEARKRL
RASWRQRGAT DAELAWIDEA LDPEVLTVGF ARRVPSYKRL TLMLRDPERL TALLRHPERP
IQIIIAGKAH PADEGGKRLI QEMVRFSDDP RVRDRIVFLP DYDMALAALL VQGCDVWLNN
PLRPLEACGT SGMKSALNGG LNLSIRDGWW DEWFDGSNGW AIPTADGVDD PDRRDDIEAA
ALYELFEEQV APLFYERDDH GLPRRWLETV KHTMVSLGPK VQATRMVREY VDQLYQPAAL
AMRRLAADNY RGARELAAWK QRVQHAWPGV RIEHVETSMN GDTPQVGGEL EVRATLVLGG
LDPDDVCVEV VLGLVNDDDE LINPTTTELV PLPASDVVYP LVRFGGTVPL DRAGTCGYTV
RIRPRHRLLT HPAEAGMAVV AEPTMGIGTL VPH
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