Gene Tfu_0585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0585 
Symbol 
ID3580159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp669306 
End bp671273 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content67% 
IMG OID637684275 
Productalpha amylase domain-containing protein 
Protein accessionYP_288646 
Protein GI72160989 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGGAC GATTTCCCAT CCTTGACGTC TCACCGGTCG TCGACATCGG CACCGCCAAA 
GCCGTCGTCG GCGAGACCTT TCCCGTGCGC GCAACCGTGT TCCGTGAAGG GCATGAGGCG
CTCGGCGCAG GTGTCGTCCT CTATACTCCC GAAGGCCAGC GCCAGCCCCT CGTCCCGCTC
CGCGAGATCG CCCCGGGCAC GGACCGCTAC GAAGCCGAGG TCACCGTCAC CTCGGAAGGA
CTCTGGCACT TCGCTATCGA AGCGTGGAGC GACCCGTACG CGACCTGGTG CCACGACGCC
CGCATCAAAA TCCCTGCCGG CCAAGACGTC GAGCTGATGC TGGAAGAAGG TGCGCGTCTC
CTCGAGCGCG CCGCCCGGCG GGTGCCCCGA CGCCCCGCGC TCGCCGAGAT CGCCGCAGCC
ATGCGCGACG GGTCCCGCTC CGCCCACGAG CGCCTCGACC TCGCCCTGTC CGACCTGGTC
CGCGACGAGC TCGCTGAACG TCCACTGCGG GAACTCGTCA CCCGGTCGCA GCGCTTCCCC
GTCATGGTGA GCCGCCGACG CGCACTCTTC GGCTCCTGGT ACGAGTTCTT CCCACGGTCC
GAAGGCGCGG TGCTCGACAC CGAGGACGGC GAACCCCGCT CCGGGACCTT CGCCACCGCC
GCCCGCCGGC TGCCCGCCAT CGCCGACATG GGGTTCGACG TCGTCTACAT TCCGCCCATC
CACCCGGTCG GCTACTCGTT CCGCAAAGGA CGGAACAACT CGACCGTGGC CCAGCCGGGC
GACCCCGGAT CCGTGTGGGC CATCGGCTCC CACGAAGGCG GGCACGACGC GATCCACCCG
GACCTGGGCA CCATCGACGA CTTCGACGCC TTCGTGGCCC GCGCCCGCGA ACTCGGCTTG
GAGATCGCCA TGGACCTGGC CCTCCAAGCG TCGCCCGACC ACCCGTGGGT CAAAGAACAC
CCCGAATGGT TCACGGTCCG CGCCGACGGG TCGATCGCGT ATGCGGAGAA CCCGCCCAAG
AAGTACCAGG ACATCTACCC GATCAACTTC GACAAGGACC CGGAGGGCAT CTTCACCGAA
GTGCGCCGCA TCGTGCGGTA CTGGATGTCC CACGGGGTGC GCATCTTCCG CGTCGACAAC
CCGCACACCA AACCGGTGGC GTTCTGGGAA CGGCTCCTGG CCGACATCGC CGCAACCGAC
CCCGATGTCA TCTTCCTATC CGAAGCGTTC ACCCGGCCCG CGATGATGCA CACCCTCGCC
AAGATCGGAT TCCACCAGTC CTACACGTAC TTCACCTGGC GCAACACCAA GCAGGAGCTG
GAGGAGTACC TCACCGAGCT CACCGGCGAA GCGGCCGCGT ACATGCGCCC GAACTTCTTC
GTCAACACGC CCGACATCCT CCACGCCTAC CTGCAGCACG GGGGACGTCC GGCCTTCGAA
GTCCGGGCGA TCCTCGCCGC CACGCTCTCC CCCACGTGGG GCATGTACTC CGGGTACGAG
CTGTGCGAGA ACCGCGCGCT CAAACCCGGC AGCGAAGAGT ACCTCGACTC GGAGAAGTAC
CAGTACAAGC CCCGCGACTG GGAGGCAGCG GAGGCCGCCG GGATCACCAT CACCCCGCTG
ATCCGCAAAC TCAACTCCCT GCGGCGCAGC CATCCCGCGC TCCAAGAGCT GCGCAACCTG
CGGTTCCACT ACGCCGACCA GCCGGAAATC ATCTGCTACT CCAAACGGCT GGCCGGAGCC
AACCACGGAG CTGACGACAC CATCCTGGTC GTCGCGAACC TCGACCCCCA CCACACACGG
GAGGCGACAG TGTGGCTGGA CATGCCTGCG CTCGGCTTCG CCCCCGGCGA CCACATCACC
GTCACAGACC AGTTGTCGGG GCACTCGTAT CACTGGGTAG AGGCCAACTA CGTCCGGCTC
GACCCGCACG TGCAGACCGC TCACATATTC ACCGTCGCCC CGGCCTAA
 
Protein sequence
MIGRFPILDV SPVVDIGTAK AVVGETFPVR ATVFREGHEA LGAGVVLYTP EGQRQPLVPL 
REIAPGTDRY EAEVTVTSEG LWHFAIEAWS DPYATWCHDA RIKIPAGQDV ELMLEEGARL
LERAARRVPR RPALAEIAAA MRDGSRSAHE RLDLALSDLV RDELAERPLR ELVTRSQRFP
VMVSRRRALF GSWYEFFPRS EGAVLDTEDG EPRSGTFATA ARRLPAIADM GFDVVYIPPI
HPVGYSFRKG RNNSTVAQPG DPGSVWAIGS HEGGHDAIHP DLGTIDDFDA FVARARELGL
EIAMDLALQA SPDHPWVKEH PEWFTVRADG SIAYAENPPK KYQDIYPINF DKDPEGIFTE
VRRIVRYWMS HGVRIFRVDN PHTKPVAFWE RLLADIAATD PDVIFLSEAF TRPAMMHTLA
KIGFHQSYTY FTWRNTKQEL EEYLTELTGE AAAYMRPNFF VNTPDILHAY LQHGGRPAFE
VRAILAATLS PTWGMYSGYE LCENRALKPG SEEYLDSEKY QYKPRDWEAA EAAGITITPL
IRKLNSLRRS HPALQELRNL RFHYADQPEI ICYSKRLAGA NHGADDTILV VANLDPHHTR
EATVWLDMPA LGFAPGDHIT VTDQLSGHSY HWVEANYVRL DPHVQTAHIF TVAPA