Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0585 |
Symbol | |
ID | 3580159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 669306 |
End bp | 671273 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637684275 |
Product | alpha amylase domain-containing protein |
Protein accession | YP_288646 |
Protein GI | 72160989 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGGAC GATTTCCCAT CCTTGACGTC TCACCGGTCG TCGACATCGG CACCGCCAAA GCCGTCGTCG GCGAGACCTT TCCCGTGCGC GCAACCGTGT TCCGTGAAGG GCATGAGGCG CTCGGCGCAG GTGTCGTCCT CTATACTCCC GAAGGCCAGC GCCAGCCCCT CGTCCCGCTC CGCGAGATCG CCCCGGGCAC GGACCGCTAC GAAGCCGAGG TCACCGTCAC CTCGGAAGGA CTCTGGCACT TCGCTATCGA AGCGTGGAGC GACCCGTACG CGACCTGGTG CCACGACGCC CGCATCAAAA TCCCTGCCGG CCAAGACGTC GAGCTGATGC TGGAAGAAGG TGCGCGTCTC CTCGAGCGCG CCGCCCGGCG GGTGCCCCGA CGCCCCGCGC TCGCCGAGAT CGCCGCAGCC ATGCGCGACG GGTCCCGCTC CGCCCACGAG CGCCTCGACC TCGCCCTGTC CGACCTGGTC CGCGACGAGC TCGCTGAACG TCCACTGCGG GAACTCGTCA CCCGGTCGCA GCGCTTCCCC GTCATGGTGA GCCGCCGACG CGCACTCTTC GGCTCCTGGT ACGAGTTCTT CCCACGGTCC GAAGGCGCGG TGCTCGACAC CGAGGACGGC GAACCCCGCT CCGGGACCTT CGCCACCGCC GCCCGCCGGC TGCCCGCCAT CGCCGACATG GGGTTCGACG TCGTCTACAT TCCGCCCATC CACCCGGTCG GCTACTCGTT CCGCAAAGGA CGGAACAACT CGACCGTGGC CCAGCCGGGC GACCCCGGAT CCGTGTGGGC CATCGGCTCC CACGAAGGCG GGCACGACGC GATCCACCCG GACCTGGGCA CCATCGACGA CTTCGACGCC TTCGTGGCCC GCGCCCGCGA ACTCGGCTTG GAGATCGCCA TGGACCTGGC CCTCCAAGCG TCGCCCGACC ACCCGTGGGT CAAAGAACAC CCCGAATGGT TCACGGTCCG CGCCGACGGG TCGATCGCGT ATGCGGAGAA CCCGCCCAAG AAGTACCAGG ACATCTACCC GATCAACTTC GACAAGGACC CGGAGGGCAT CTTCACCGAA GTGCGCCGCA TCGTGCGGTA CTGGATGTCC CACGGGGTGC GCATCTTCCG CGTCGACAAC CCGCACACCA AACCGGTGGC GTTCTGGGAA CGGCTCCTGG CCGACATCGC CGCAACCGAC CCCGATGTCA TCTTCCTATC CGAAGCGTTC ACCCGGCCCG CGATGATGCA CACCCTCGCC AAGATCGGAT TCCACCAGTC CTACACGTAC TTCACCTGGC GCAACACCAA GCAGGAGCTG GAGGAGTACC TCACCGAGCT CACCGGCGAA GCGGCCGCGT ACATGCGCCC GAACTTCTTC GTCAACACGC CCGACATCCT CCACGCCTAC CTGCAGCACG GGGGACGTCC GGCCTTCGAA GTCCGGGCGA TCCTCGCCGC CACGCTCTCC CCCACGTGGG GCATGTACTC CGGGTACGAG CTGTGCGAGA ACCGCGCGCT CAAACCCGGC AGCGAAGAGT ACCTCGACTC GGAGAAGTAC CAGTACAAGC CCCGCGACTG GGAGGCAGCG GAGGCCGCCG GGATCACCAT CACCCCGCTG ATCCGCAAAC TCAACTCCCT GCGGCGCAGC CATCCCGCGC TCCAAGAGCT GCGCAACCTG CGGTTCCACT ACGCCGACCA GCCGGAAATC ATCTGCTACT CCAAACGGCT GGCCGGAGCC AACCACGGAG CTGACGACAC CATCCTGGTC GTCGCGAACC TCGACCCCCA CCACACACGG GAGGCGACAG TGTGGCTGGA CATGCCTGCG CTCGGCTTCG CCCCCGGCGA CCACATCACC GTCACAGACC AGTTGTCGGG GCACTCGTAT CACTGGGTAG AGGCCAACTA CGTCCGGCTC GACCCGCACG TGCAGACCGC TCACATATTC ACCGTCGCCC CGGCCTAA
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Protein sequence | MIGRFPILDV SPVVDIGTAK AVVGETFPVR ATVFREGHEA LGAGVVLYTP EGQRQPLVPL REIAPGTDRY EAEVTVTSEG LWHFAIEAWS DPYATWCHDA RIKIPAGQDV ELMLEEGARL LERAARRVPR RPALAEIAAA MRDGSRSAHE RLDLALSDLV RDELAERPLR ELVTRSQRFP VMVSRRRALF GSWYEFFPRS EGAVLDTEDG EPRSGTFATA ARRLPAIADM GFDVVYIPPI HPVGYSFRKG RNNSTVAQPG DPGSVWAIGS HEGGHDAIHP DLGTIDDFDA FVARARELGL EIAMDLALQA SPDHPWVKEH PEWFTVRADG SIAYAENPPK KYQDIYPINF DKDPEGIFTE VRRIVRYWMS HGVRIFRVDN PHTKPVAFWE RLLADIAATD PDVIFLSEAF TRPAMMHTLA KIGFHQSYTY FTWRNTKQEL EEYLTELTGE AAAYMRPNFF VNTPDILHAY LQHGGRPAFE VRAILAATLS PTWGMYSGYE LCENRALKPG SEEYLDSEKY QYKPRDWEAA EAAGITITPL IRKLNSLRRS HPALQELRNL RFHYADQPEI ICYSKRLAGA NHGADDTILV VANLDPHHTR EATVWLDMPA LGFAPGDHIT VTDQLSGHSY HWVEANYVRL DPHVQTAHIF TVAPA
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