| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0582 |
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| Symbol | |
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| ID | 3580156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 663757 |
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| End bp | 666006 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684272 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_288643 |
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| Protein GI | 72160986 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCCC GGCCTGCAGT CCGCCAACCC GCTGGCCTGC CCTGCCCGCA ACCCTGCAAC
CGGTACGGAT ATCCGATGAC CAACGCACTC CTCGCTGAAA TCGACGCCCT GGTCGCTGGC
ACCCACCACA ACCCGCACGC CCTGCTCGGC GCGCATCCCG GCCCGGAAGG GGTGTGGGTG
CGTGCCTTGC GCCCGCTCGC CCGCTCCGTG CACGTGCTCC TCGCCAACGG CAGCCGGGTC
GAACTTCCCC ACCTGCACAA AGGCGTGTTC GCCGGGGTGG TTCCGGGTGC CGAAGTCCCC
GACTACCGGC TGGTGGTGCG CTACGACGAC GGCACCGAGC TCACCGTGGA CGACCCCTAC
CGGCACCTGC CCACTCTCGG AGAGCTCGAC ATCCACCTCA TCCAGGAAGG GCGGCACGAA
GAACTGTGGC GCGTGCTCGG CGCGCACACC AAACGCTTCC CTTCTGTCCT GGGCGACACG
GAAGGGACCG CGTTCACCGT GTGGGCGCCC AACGCCCGCG GGGTACGGGT GATTGGGGAC
TTCAACCACT GGGACGGCAC TGGGCACCCC ATGCGTTCGC TCGGCTCCTG CGGGGTGTGG
GAGCTGTTCA TCCCCGGGGT CGGCGACGGT ACCCGGTACA AGTACCAGGT GCTCGGCGCC
GACGGAGTGT GGCGGGAGAA AGCCGACCCG GTGGCGTTCG CCACCCAGGC GCCGCCAGAG
ACCGCGTCCG TGGTGTTCAC CTCCCGCTAC ACCTGGCAGG ACGACGAGTG GCTGACGCAG
CGCGCCGCCG CTGACCTGCA CCGCAAGCCG ATGAGCATCT ACGAGGTGCA CCTCGGTTCG
TGGCGGCCCG GCCTGTCCTA CCGGGAGCTT GCCGACCAGC TCGTGGACTA CGTCCGCGAG
CTGGGGTTCA CGCACGTGGA ATTCCTGCCG GTCGCGGAGC ACCCGTTCGG CGGCTCGTGG
GGCTACCAGG TCACCTCCTA TTACGCGCCC ACCGCCCGGT TCGGCTCCCC CGACGACTTC
CGGTACCTGG TCGACCGCCT CCACCAGGCG GGGATCGGGG TGTTCCTGGA CTGGGTGCCC
GCGCACTTCC CGAAAGACGA CTGGGCGCTA TCCCGCTTCG ACGGCACCGC CCTGTACGAG
CACCCGGACC CGCGCCGCGG CATCCACCCC GACTGGGACA CGCTGATCTT CAACTACGGC
CGCACCGAGG TCCGCAACTT TCTGGTCGCC AACGCACTGT TCTGGCTGGA AGAGTTCCAC
ATCGACGGGC TGCGCGTGGA CGCGGTGGCT TCCATGCTCT ACCTGGACTA CTCCCGGGAG
TCCGGCCAGT GGGAGCCCAA CGCCTACGGC GGGCGGGAGA ACCTGGATGC CATCGACTTC
CTGCGGGAGC TCAACGCCAC CGCCTACCGC CGCAACCCCG GAATCGCGAT GATCGCCGAG
GAATCCACCG CCTGGCCCGG GGTGACCCGC AGCACCGATA CGGGAGGGCT CGGCTTCGGG
TTCAAGTGGA ACATGGGGTG GATGCACGAC ACCCTGTCCT ACCTGCAGCA CGACCCCGTC
CACCGGCAGT ACCACCACAA CGAAGTCACC TTCTCCATGG TGTACGCCTA CAGCGAGAAC
TATGTGCTGC CGCTCTCCCA CGACGAAGTC GTGCACGGCA AGAGGTCGCT GCTGTACAAG
ATGCCGGGGA ACGAGTGGCA GCGCTGCGCG AACCTGCGGG CGCTCCTGGC CTACATGTGG
GCGCACCCAG GCAAACAGCT CCTGTTCATG GGCAACGAGA TCGCCCAAGG CGACGAGTGG
TCGCACGACG CCGGGGTGCA GTGGTGGCTG CTGCGCTACC CCCACCATGC CGGGATGCGC
CGGCTCGTCG CCGACCTCAA CCGGCTGTAC CGGAACACGC GGGCGCTGTG GAGCCAAGAC
ACGGTCCCGG AGGGGTTCAC CTGGTTGGAC GGCGGTGACG CGAGCGGCAA CACGCTGTCG
TTTCTGCGGT GGGGAGACGA CGGGTCGGTC CTGGCCTGCC TCGTGAACTT CAGCGGCCGC
CCGCACCCGG AGCGCCGGGT CGGCCTGCCC TATGCGGGCC GGTGGCGGGA GATCCTCAAC
ACGGACGCCG TGCTTTACGG CGGCAGCGGC GTCTCGCAGC CGGGGATCAT CGAGGCCTCC
GAGGAGACGC CGTGGCAGGG CCAGCCCGCT TCCGCTCTGG TGACCTACCC GCCGCTGGGG
GTGTCCTGGC TGGTGTTCGA CGGGACGTGA
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| Protein sequence | MTARPAVRQP AGLPCPQPCN RYGYPMTNAL LAEIDALVAG THHNPHALLG AHPGPEGVWV
RALRPLARSV HVLLANGSRV ELPHLHKGVF AGVVPGAEVP DYRLVVRYDD GTELTVDDPY
RHLPTLGELD IHLIQEGRHE ELWRVLGAHT KRFPSVLGDT EGTAFTVWAP NARGVRVIGD
FNHWDGTGHP MRSLGSCGVW ELFIPGVGDG TRYKYQVLGA DGVWREKADP VAFATQAPPE
TASVVFTSRY TWQDDEWLTQ RAAADLHRKP MSIYEVHLGS WRPGLSYREL ADQLVDYVRE
LGFTHVEFLP VAEHPFGGSW GYQVTSYYAP TARFGSPDDF RYLVDRLHQA GIGVFLDWVP
AHFPKDDWAL SRFDGTALYE HPDPRRGIHP DWDTLIFNYG RTEVRNFLVA NALFWLEEFH
IDGLRVDAVA SMLYLDYSRE SGQWEPNAYG GRENLDAIDF LRELNATAYR RNPGIAMIAE
ESTAWPGVTR STDTGGLGFG FKWNMGWMHD TLSYLQHDPV HRQYHHNEVT FSMVYAYSEN
YVLPLSHDEV VHGKRSLLYK MPGNEWQRCA NLRALLAYMW AHPGKQLLFM GNEIAQGDEW
SHDAGVQWWL LRYPHHAGMR RLVADLNRLY RNTRALWSQD TVPEGFTWLD GGDASGNTLS
FLRWGDDGSV LACLVNFSGR PHPERRVGLP YAGRWREILN TDAVLYGGSG VSQPGIIEAS
EETPWQGQPA SALVTYPPLG VSWLVFDGT
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