| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0554 |
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| Symbol | |
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| ID | 3580429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 630064 |
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| End bp | 630810 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637684244 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_288615 |
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| Protein GI | 72160958 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.799552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGGTC AACGAACTGT TGAGGACAGT CCCCGGGTTC CGAAGTACTA CCAGGTCAAA
AAACAGCTGT TGCAGTTGAT CGAGACGATG CCCGCGGGCA ACCCGGTCCC CCCGGAGCGG
ACGCTGGCGA CCCAATTCGG CACGTCCCGC ACGACGGTGC GACAGGCGCT CAGCGAAATG
GTGGTGGAGG GACGGCTGCT GCGCATCCAG GGCAAGGGCA CCTTTGTCGC CAAGCCGAAG
GTGACCCAGG TCCTGCAGTT GACCAGCTAC ACCCAGGAGA TGCGTTCGCA CGGCCTCCAG
CCAGACACCC GGATTCTCGA CGTGGGCTAC ATCAACGCGG ATGAGGAGCT GGCCGGGCTG
CTGGCGATCC GGCTCGGCGG CCGGGTACTG CGCATCGAAC GACTGCGGCT GGCCAACGGC
GAGCCGATGG CTGTGGAAAC CGCGCACCTG CCCGCACGCC GGTTTCCCGG GCTACGCCGC
CGCCTGGACC GGCATGCTTC GCTCTACGAA GCGCTGGCGA CCGTCTACAA CGTGCACCTC
GCGGAAGCGG AAGCGACTAT CGAGACGGTG CTGGCTACCC CGAAAGAAGC GCAGTTGCTC
GGCGTGGACG TCGGCCTGCC GCTGGTCCTG CACTGCCAGC ACAGTTTTGA CGACGAGGGC
AATCCAGTGG AGTGGGTACG GTCGCTCTAT CGCGGCGACC GGTACAAGTT CGTCACCCGG
CTCCGCCCGC CGAAGGAGCG GACGTAG
|
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| Protein sequence | MTGQRTVEDS PRVPKYYQVK KQLLQLIETM PAGNPVPPER TLATQFGTSR TTVRQALSEM
VVEGRLLRIQ GKGTFVAKPK VTQVLQLTSY TQEMRSHGLQ PDTRILDVGY INADEELAGL
LAIRLGGRVL RIERLRLANG EPMAVETAHL PARRFPGLRR RLDRHASLYE ALATVYNVHL
AEAEATIETV LATPKEAQLL GVDVGLPLVL HCQHSFDDEG NPVEWVRSLY RGDRYKFVTR
LRPPKERT
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