| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0548 |
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| Symbol | |
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| ID | 3580423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 623197 |
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| End bp | 623967 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637684238 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_288609 |
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| Protein GI | 72160952 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGGCCT CCGTGGGAAC CCTGCTCCGG GAGCGGTCCG TGACTGCGAC GGGGATGGCA
CGTGTGCGGT TCGAACCGCT CCAGCCATAT GGTGAGGTTG CGGTTGCCAC CGGGGAGAAC
CGTGCAAGGA GGCCGACGGG GTTGAGTCAG AGTCAGGAGA CCATTGAGGA CCGGGCGGCT
CGGTTCGAGC GAGACGCCAT GCCGCTCCTG GACCAGTTGT ACTCGGCGGC GTTGCGGATG
ACCCGCAATC CGACGGACGC GGAGGACCTC GTCCAGGAGA CGTTCACCAA AGCCTTCGGA
TCGTTCCACC AGTTCAAGGA GGGGACGAAC CTCAAGGCGT GGCTCTACCG GATCCTCACC
AACACCTTCA TCAACTCCTA CCGCAAGAAG CAGCGCGAGC CGCGGCAGGC CGGTACGGAG
GACATTGAGG ACTGGCAGCT TGCCCGGGCG GCCTCCCATA CCTCCAGTGG CCTGAAGTCT
GCTGAGGCCG AGGCACTAGA GCACCTCCCG GACACCGATG TCAAACGGGC GCTGCAGGAG
TTGCCGGAGG ATTTCCGTAT CGCGGTCTAC CTCGTGGATG TCGAGGGCTT CGCCTACAAG
GAGGCCGCTG AGATCATGGA CACTCCAATC GGCACCGTGA TGTCCCGACT GCATCGTGGC
AGACGTCAAC TGCGCTCTTT GTTGGAGGAG TACGCGTTGG AGCGCGGTTT CCTCTCTGTT
GCGGAGAGGG AGTCCGTGGG CGCGGTGAAT GGTGGGAAGG ACCAGCGATG A
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| Protein sequence | MPASVGTLLR ERSVTATGMA RVRFEPLQPY GEVAVATGEN RARRPTGLSQ SQETIEDRAA
RFERDAMPLL DQLYSAALRM TRNPTDAEDL VQETFTKAFG SFHQFKEGTN LKAWLYRILT
NTFINSYRKK QREPRQAGTE DIEDWQLARA ASHTSSGLKS AEAEALEHLP DTDVKRALQE
LPEDFRIAVY LVDVEGFAYK EAAEIMDTPI GTVMSRLHRG RRQLRSLLEE YALERGFLSV
AERESVGAVN GGKDQR
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