| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0546 |
|---|
| Symbol | |
|---|
| ID | 3580421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 620917 |
|---|
| End bp | 621774 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637684236 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_288607 |
|---|
| Protein GI | 72160950 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGTC GGTACGCGTT GGGACGCAAA AAAGAAGAGA TCCGGCGGGT TTTCGGCCTG
CCTGAGTCGG AGGTCGACGC GCCCGGCGCG GACGAAGCCC GGCGTTGGCC GCCGCGGGAG
GAGCTCGCCC CCGACTACAA CATCGCCCCC GGCAAGCACG CCTATGCGGT ACTCGGCCGT
GCCCCGGGCG AGCCGGTCTC CGGGGCGGCC GGGCCCCGTC ATCTCGTCAC ACTGCGGTGG
GGGCTGGTGC CGTCGTGGGC GAAGGACAGC AACGTCGGCT ACCGGATGAT CAACGCCCGT
GCGGAGACGG TGACGGACCG GCCGGCGTTC CGCGCCGCGT TTGCGCGCCG CCGCTGCCTG
CTGCCGGCCG ACGCCTACTA CGAATGGCAG TTGCTGCATA CCTCCGGCGA AGCCCAGCCG
GGCACGTCCC CGGTGACCGA CCCGGAGCAC CGGTCGCGTA AAGCGAAGAC CCGCAAACGC
CCGTTCGCGG TCCGCTACGC CGACGACCGG CCGCTCGCCC TGGCAGGCAT CTTCGAGCGG
TGGCGGGACC CGGCCGTCCC CGAAGAAGAC CCGGCCGCGT GGCTGTGGAG TTTCGCGATC
ATCACGACCG AGGCTGCACC GGAGCTCGCC CACATCCACG AGCGGATGCC GGTGGTCGTG
GGGGAGGAGG ACTGGGCCAC GTGGCTAGAC CCGGAGGCAG ACCGGGATGA CTTGCTGTCT
GTGCTTGACG CCACACCGGT GGAGGATTTC ACGGTCTACC CGGTGGGAAC CGAGGTGAAC
GCGGTGCGGA ACAACGGTCC GCACCTGCTC GTTCCGGTGT CCGCGGAATC CGAAGGAACT
TCGGAGACGC TGTTCTGA
|
|---|
| Protein sequence | MCGRYALGRK KEEIRRVFGL PESEVDAPGA DEARRWPPRE ELAPDYNIAP GKHAYAVLGR
APGEPVSGAA GPRHLVTLRW GLVPSWAKDS NVGYRMINAR AETVTDRPAF RAAFARRRCL
LPADAYYEWQ LLHTSGEAQP GTSPVTDPEH RSRKAKTRKR PFAVRYADDR PLALAGIFER
WRDPAVPEED PAAWLWSFAI ITTEAAPELA HIHERMPVVV GEEDWATWLD PEADRDDLLS
VLDATPVEDF TVYPVGTEVN AVRNNGPHLL VPVSAESEGT SETLF
|
|---|
| |