| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0544 |
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| Symbol | |
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| ID | 3580419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 618717 |
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| End bp | 619991 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637684234 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_288605 |
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| Protein GI | 72160948 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAA CCGCGTCGCA CTGGCCTGCC CCGACCGTGT CCCGTCCTGT GGACGCCACG
GTCAGCCTGC CCGGCTCCAA ATCGATGACC AACCGCGCGC TGATCCTGGC CGCGCTGTCG
GAGACTCCCA GCGTGGTGCG CGCCCCCCTG TACAGCCGCG ACACCACGTT GATGGTGGGC
GCGCTGCGGG CGCTCGGTAT CGGCGTGCAC GAAGCAGACG GGGACTGGGA GGTGACTCCG
ACACCGCCGC AGGGCCCCGC AGCCATCGAC GTGGGCAACG CCGGGACAGT GATGCGGTTC
GTGCCGCCGC TGGCCGCCAT GGCCCGTGGC GAGGTGTCCT TCGACGGCGA CCCGCGCGCC
CGGGAGCGGC CCGTCGGTCC CCTCCTCGCC GCGCTGCGCA CCCTGGGCGC GGAGATCGAC
GACGGGGGTC GCGGCGCCCT TCCCATGGTG ATCCGCGGCC GAGGTGAACT CCCCGGCGGT
ACGGTCACCC TGGACGCTTC CGGCTCGTCC CAGTTCGTCT CCGCCCTCCT GCTCAGCGGA
GCCCGGTTCA GCAAGGGCGT GGAGGTGCGG CACGTGGGGC CCCCGGTTCC TTCCCAGCCC
CACCTGAACA TGACCGTGCA GATGCTGCGC GACGCCGGGG TGGAAGTGGA CACGGACACC
CCCGACGTGT GGCGGGTCGC GCCGGGACCG ATCCGGGTCA CCGAGATCAC GGTCGAACCC
GACCTGTCCA ACGCTGCCCC TTTCCTGGCT GCCGCCCTGG TCACCGGTGG GCGGGTCACG
GTCCGCGGCT GGCCGCGGCA CACCACCCAG CCGGGGGACG CATTGCGCAC CCTGTTCGCC
GAGATGGGCG GCCGTGTCGA GTTCACCGAC GAAGGGCTGA CCCTGCACGG CACCGGGGAA
ATCCGTGGAC TCACCGCTGA CCTGCGCGAC GTCGGAGAGC TCACCCCGAC CATCGCGGCC
GTGGCCGCAC TCGCGTCCAC CCCGTCCCGT CTCACCGGTA TCGCGCACCT CCGCAGGCAC
GAAACCGACC GGATCGCAGC GTTGGTCCGC GAGATCAACC GCCTAGGCGG GGACGCAGAA
GAGCTTCCCG ACGGGCTGGT CATCCGCCCG CGCCCCCTGC ACGGCGGTGT CTTCCACTCC
TACGACGACC ACCGGATGGC CACTTCCGGG GCGGTCATCG GACTCGTGGT GCCTGGAGTG
GAGGTGGAAA ACATCGCTAC GACAGGCAAG ACCCTTCCGG ACTTTCCCCG TCTGTGGAGC
GAGGTTCTCT CTTGA
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| Protein sequence | MAETASHWPA PTVSRPVDAT VSLPGSKSMT NRALILAALS ETPSVVRAPL YSRDTTLMVG
ALRALGIGVH EADGDWEVTP TPPQGPAAID VGNAGTVMRF VPPLAAMARG EVSFDGDPRA
RERPVGPLLA ALRTLGAEID DGGRGALPMV IRGRGELPGG TVTLDASGSS QFVSALLLSG
ARFSKGVEVR HVGPPVPSQP HLNMTVQMLR DAGVEVDTDT PDVWRVAPGP IRVTEITVEP
DLSNAAPFLA AALVTGGRVT VRGWPRHTTQ PGDALRTLFA EMGGRVEFTD EGLTLHGTGE
IRGLTADLRD VGELTPTIAA VAALASTPSR LTGIAHLRRH ETDRIAALVR EINRLGGDAE
ELPDGLVIRP RPLHGGVFHS YDDHRMATSG AVIGLVVPGV EVENIATTGK TLPDFPRLWS
EVLS
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