| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0528 |
|---|
| Symbol | |
|---|
| ID | 3580326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 599745 |
|---|
| End bp | 600239 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637684216 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_288589 |
|---|
| Protein GI | 72160932 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAGTAC ACACATCGGT TCGCCGTGGA CACGACTGTG AAGGGCACAA CCGGGGCACC
CTGATCCGTC GGGCGCCGCA GGGCTGGCGG GTCGACGGCA CCGAAGAGCA GCTTCCTGAC
CTGCTCAACG CCATGATCCT CGCCGATCTG CTCGCCGGTG GCACCCCGCC GACTGACCTC
CCCACTCCGC CCCGCGCCAC CCCTGACTCG TCGGAGACCG AGCGGCTCCG GGTGACCGTG
CAGCAGTTGG AGCATGCGCT GCGCACCCGG GTCGTGGTCG AGCAGGCGAT CGGGGTGCTC
GCGGAACGGC ATCGGATCGC CCCGCGCACG GCGTTCGAAC GGTTGCGCCG TGCCGCGCGC
TGCCGGGGGA AGAAGGTCGC CGCGCTCGCG CACGAGGTGG TGGAGAGCAC CCGGAATCCG
TTGGTGGCGC TCCCCGAAGA ACTGGCTCGG GAGGGTTCAG CGGTGCAGGC GTGGCCCCCG
AAGCGCGCTA GTTGA
|
|---|
| Protein sequence | MGVHTSVRRG HDCEGHNRGT LIRRAPQGWR VDGTEEQLPD LLNAMILADL LAGGTPPTDL
PTPPRATPDS SETERLRVTV QQLEHALRTR VVVEQAIGVL AERHRIAPRT AFERLRRAAR
CRGKKVAALA HEVVESTRNP LVALPEELAR EGSAVQAWPP KRAS
|
|---|
| |