| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0500 |
|---|
| Symbol | |
|---|
| ID | 3579911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 566517 |
|---|
| End bp | 567989 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637684188 |
|---|
| Product | tyrosine protein kinase:Serine/threonine protein kinase |
|---|
| Protein accession | YP_288561 |
|---|
| Protein GI | 72160904 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCG CCAGCCAGGA CAACGACGGC GGGCCCAGCC AATCGGGAGG ACCGATGGCC
GATCCGGCCC CCTTGATCGA CACCGACCCC GCGCGCATCG GGGAGTACAC GCTACTTGGA
CGGCTCGGAC AGGGCGGTCA GGGAGTCGTC TACCTCGGAA GCGCCCCTGA CGGGGCACGG
GTGGCGGTCA AGACGCTGCA CCGGGACGCC CTCGACCTGC CGGGCCTGCG CGAACAGCTC
GCCGAAGAAG TCGAGATGGC CCGCCGGGTT GCGCGGTTCT GCACCGCGCA AGTGCTCGCC
GCCGACCTCG ACGCCGACCC GCCCTACGTG GTCAGCGAGT ACGTGGAAGG CCCCTCGCTG
CAGGCCGTGG TCCGCGAGCG AGGGCCGCTG CGCGGAGCCA GCCTGGAACG GCTCGCAGTC
GGCACCCTCA CCGCCCTCGC CGCCATCCAC CAGGCCGGAA TCGTGCACCG CGACTTCAAA
CCGGCCAACG TGCTCATGGC CCCCGGGGGC CCGCGCGTCA TCGACTTCGG CATCGCCCGG
GCCCTCGAAG GAACCGCGAT CCTCACCAGC AGGATCGCCG GGACCCCCGC CTACATGGCC
CCGGAGCAGA TCACCGGTGG GCCGCTCGGA CCGGCCGTCG ACATGTTCGC CTGGGGTGCC
ACCCTCGTCT ACGCGGCCAA CGGGCGCGGC CCGTTCGGCC ACGGCTCCCT GAAAGCCGTA
GTCCAGCGAG TCATCAACGA CGAACCGGAC TTCGGGGAGC TCAGCGGCAC CCTGCGCGAA
ATCGCGGAAC GCTGCCTGAA CAAAGACGCC GCCCAGCGGC CGACCGCGGC CGAAACCCTC
ATGCTGGTGC TCGGCATCGA AGGGCCGCCC CCGACTGAGG AGCCCAGCAC GGACACGGCC
ATCCCCGTCA CCCACCAGAC CCTCGTGGCC GGGGCGATCG CCGCTGCCGA CACGGGAGAG
CAGGAGAGCG CCGCGGAACT CTACCGCTCC TACCCGCCGG CCCCTCCGCC ACCGCACTCC
AACGTCGCGG CCCAGCCGTC TCCGACGCCC CCGCCACACC CGCAGACCGC CAGCGGCCCC
CAGCCTTCCC TGCCCTCGAC TGGTGCACAG CACTCCGGAT ACGGGTATGC GACCGGGCCG
CACCAGTCCG GATACGGGTA TGCGACCGGT CCCCAGCAGG GCGGGTACGC GCCCCCGCCC
GGACCGCACC AGCACGCCTA TCCCACCCCC CATTCCGGGA ATGCGGCCAT CCCGCCCCAC
GGGGGGCCGA GCGGCCCCTA CGCCCCCGCC CAGCCGTGGA TGCCGTCCAC CGGGGGCTAC
CCCCAGACCA GCCAGCCCTA TAGCGGGCAG CAGTACCAGC AGCAGGCCGA GGGGACCAGC
ACCGCGTTCG TGCTCGGCGT CGTCAGCATC GCCGTCATCG CCGGGGTCCT GCTCTTCATC
CTGCTGTTCC TGCTGATCGG CAGCCTCGGC TGA
|
|---|
| Protein sequence | MPAASQDNDG GPSQSGGPMA DPAPLIDTDP ARIGEYTLLG RLGQGGQGVV YLGSAPDGAR
VAVKTLHRDA LDLPGLREQL AEEVEMARRV ARFCTAQVLA ADLDADPPYV VSEYVEGPSL
QAVVRERGPL RGASLERLAV GTLTALAAIH QAGIVHRDFK PANVLMAPGG PRVIDFGIAR
ALEGTAILTS RIAGTPAYMA PEQITGGPLG PAVDMFAWGA TLVYAANGRG PFGHGSLKAV
VQRVINDEPD FGELSGTLRE IAERCLNKDA AQRPTAAETL MLVLGIEGPP PTEEPSTDTA
IPVTHQTLVA GAIAAADTGE QESAAELYRS YPPAPPPPHS NVAAQPSPTP PPHPQTASGP
QPSLPSTGAQ HSGYGYATGP HQSGYGYATG PQQGGYAPPP GPHQHAYPTP HSGNAAIPPH
GGPSGPYAPA QPWMPSTGGY PQTSQPYSGQ QYQQQAEGTS TAFVLGVVSI AVIAGVLLFI
LLFLLIGSLG
|
|---|
| |