Gene Tfu_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0498 
Symbol 
ID3579909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp564934 
End bp565590 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content71% 
IMG OID637684186 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_288559 
Protein GI72160902 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.539356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTGG AGAGTCCGCC CCAGGAGTCG TCCGGGGCGG ACTTCCCTTC ACAAGGGGCA 
CGCCGCGGCG CCGACGGGCG GTTCCGCTGC CCGTGGGCGT TGGGCGCCGC CGATTTGATG 
CGCTACCACG ACCTGGAATG GGGCGTCGTG GTCCGCGACG ATCGGGGACT GTTCGAACGG 
GTCAGCCTGG AAGCGTTCCA GGCCGGGCTG TCGTGGCTGA CCGTGCTGCG GAAACGCGCG 
GCGCTCCGGG AGGTGTTCTG CGGTTTCGAC ATGGCCCGGG TTGCGGCGTT CACGGAGCGG 
GACGTGCAGC GGCTGCTCGC GGACGCGCGA ATCATCCGCA GCCGCGCCAA GATCGAAGCG 
GTCATCAGCA ATGCGCGTGC GGCTTTGGCA CTGCCGGAAG GGCTGGCGGA GTTCGTGTGG 
CGGTATGCGC CTGAGTCGCC GCCGCCCGCA CCGAAGACGG CCGCGGACGT GCCCGCGTCC 
ACCCCGGAGA GCGCCGCGTT GGCGCGGGCG TTGAAGCAGC GCGGGTTCCG TTTCGTCGGC 
CCGACGACCG TCTACGCGAT GATGCAGGCG GTGGGGATGG TGGACGACCA CCTCGTCGAC 
TGCCACTGCC GTGGGAGCGG CACTGCCCGC GGGTATCCCG CGGAATCCCC AGCCTGA
 
Protein sequence
MSVESPPQES SGADFPSQGA RRGADGRFRC PWALGAADLM RYHDLEWGVV VRDDRGLFER 
VSLEAFQAGL SWLTVLRKRA ALREVFCGFD MARVAAFTER DVQRLLADAR IIRSRAKIEA 
VISNARAALA LPEGLAEFVW RYAPESPPPA PKTAADVPAS TPESAALARA LKQRGFRFVG 
PTTVYAMMQA VGMVDDHLVD CHCRGSGTAR GYPAESPA