| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0495 |
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| Symbol | |
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| ID | 3579906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 562424 |
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| End bp | 563488 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637684183 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_288556 |
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| Protein GI | 72160899 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGATC TCACCGCGGA TGTCCGTGAC CTCACTGCAC GCCTCATCGA CATCGCGTCG
GTGAGCGGGG AAGAGGAGCC GCTCGCTGAC GCGGTAGAGC AGGCGCTGCG GTCCTATGCG
CATTTGACTG TGCTGCGGGA CGGCAACGCG GTCGTGGCCC GCACCGACCT GGGGCGGGAG
CGGCGCGTGA TCCTCGCCGG GCATCTGGAC ACGGTGCCGA TCGCCGACAA CGTGCCTTCC
CGCGTCGTGG ACGGCAGGCT CTACGGCTGC GGGGCCTCCG ACATGAAGAG CGGGGTGGCG
GTCCAGCTCA AGCTGGCCGC GACCCTGACC GACCCGGTCT ACGACCTCAC GTTCGTCTTC
TACGACTGCG AGGAGGTCGA AGCGGAGCGC AACGGGCTGC GACGGCTCGT CGCCCGGCAT
CCCGACTGGC TGCGCGGGGA CTTCGCGGTG CTGCTGGAGC CCACGGGGGG CCAGATCGAA
GGCGGCTGCC AGGGCACCAT GCGGGTGGAG GTGACCGCGC AGGGGGTGCG CGCGCACAGC
GCCCGCTCGT GGATGGGCCG CAACGCCATC CACGAAGCCG GCCGGATCCT CGACGTGCTG
CGCGCCTACA CGCCGCGCCA GCCCGAAGTG GACGGACTGC GCTACCACGA AGGGCTCAAC
GCGGTGGGGA TCACCGGCGG GGTGGCGGGC AACGTCATCC CCGACCAGTG CGTCGTCACC
GTCAACTACC GGTTCGCCCC CGACCGCACC CCGCAGGAAG CCGAAGCCCA CCTGCGGGAA
GTGTTCGACG GGTTCGACGT GCGGGTGACC GACGTGGCGG CAGGGGCCCG CCCAGGGCTG
GACCATCCCA CGGCGGCCGC GTTCGTGGCC TCGGTCGGCG GCGGGCAGGC ACGCGCGAAA
CTCGGGTGGA CCGATGTGGC GCGCATGGCC GAGCTGGGGA TTCCCGCGGT CAACTACGGT
CCCGGGGATC CCACCCTCGC GCACACGAAA GACGAGTGGG TGGACTTGGC GGAGATCGCC
ACCGCGGAGC AGCGGATGGC CGCCTGGCTG ACCGGGGCAG GGTAA
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| Protein sequence | MLDLTADVRD LTARLIDIAS VSGEEEPLAD AVEQALRSYA HLTVLRDGNA VVARTDLGRE
RRVILAGHLD TVPIADNVPS RVVDGRLYGC GASDMKSGVA VQLKLAATLT DPVYDLTFVF
YDCEEVEAER NGLRRLVARH PDWLRGDFAV LLEPTGGQIE GGCQGTMRVE VTAQGVRAHS
ARSWMGRNAI HEAGRILDVL RAYTPRQPEV DGLRYHEGLN AVGITGGVAG NVIPDQCVVT
VNYRFAPDRT PQEAEAHLRE VFDGFDVRVT DVAAGARPGL DHPTAAAFVA SVGGGQARAK
LGWTDVARMA ELGIPAVNYG PGDPTLAHTK DEWVDLAEIA TAEQRMAAWL TGAG
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