| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0494 |
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| Symbol | dapD |
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| ID | 3579905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 561494 |
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| End bp | 562330 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637684182 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_288555 |
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| Protein GI | 72160898 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACCT CGTACACCAG TCCGCTCCCG GAGAGCATCG ACGAGCTGTG GGAGCGCCGC
TCCGAACTCA CTCCCGACGA CGCTGAGGCC CGTGAGATCA TCGTGGGCGC GGTCGACCAG
ATCGACGCCG GCAAGGCGCG CGTCGCCCAC GTGGACCCTG AGACCGACGA GGTCGTCGTG
GACCAGCGGG CCAAGCGCGC GATCCTGTTG AGCTTCCGCG TGCTGGGGAT GGAAGAGTCC
ACGGTGGGCG GCTTCCACTA CCACGACCGC ATCCCGCTGA AGACCCGGTT GGACGGGGTG
CGCGTGGTGC CGGGCGCGAT CGCCCGGTGG GGTTCCTACA TCGCCCCGGG GACGGTGCTG
ATGCCGTCCT TCACCAACAT CGGCGCCTAC GTCGACTCCG GCACCATGGT GGACACGTGG
GCCACGGTCG GCTCCTGCGC CCAGGTCGGC AAGAACGTGC ACCTGTCCGG CGGGGTCGGG
GTCGGCGGTG TGCTGGAGCC GCCGCAGGCG TCCCCGGTCA TCATCGAGGA CGACGCGTTC
CTGGGCTCGC GCAGCATGGT GGTCGAGGGG GCGCGGGTGC GCCGCGGCGC CAAGCTCGGC
GCGGGCACGA TCCTCACTGC CTCGACCCGC GTGTTCGACG CCGAGACCGG TGAAGAGCTC
AAGCGCGGTG AAGCTCCGGC CTGGTCGGTG TGCGTGACCG CCAACCGGGT GAAGAGCTTC
CCGGGCGGCG ACTTCGGCCT GCCCTGCCTG CTCGTGCTCA AGCGCCTGGA GGAGGGGCAG
GAGCACGACA AGCTCGCGCT CAACGAACTG CTCCGCGAGC ACGGCGTCAA CGGCTGA
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| Protein sequence | MTTSYTSPLP ESIDELWERR SELTPDDAEA REIIVGAVDQ IDAGKARVAH VDPETDEVVV
DQRAKRAILL SFRVLGMEES TVGGFHYHDR IPLKTRLDGV RVVPGAIARW GSYIAPGTVL
MPSFTNIGAY VDSGTMVDTW ATVGSCAQVG KNVHLSGGVG VGGVLEPPQA SPVIIEDDAF
LGSRSMVVEG ARVRRGAKLG AGTILTASTR VFDAETGEEL KRGEAPAWSV CVTANRVKSF
PGGDFGLPCL LVLKRLEEGQ EHDKLALNEL LREHGVNG
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