| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0459 |
|---|
| Symbol | fumC |
|---|
| ID | 3579524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 519985 |
|---|
| End bp | 521376 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637684147 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_288520 |
|---|
| Protein GI | 72160863 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.907865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAT ACCGCATCGA GCGGGACTCG ATGGGCGAGG TCAAGGTTCC TGTCGAGGCC
AAGTGGCGGG CGCAGACCCA GCGCGCGGTC GAGAACTTCC CTATCTCGGG GCAGGGCCTG
GAGGCCGCGC ACATCGCGGC ACTGGGCCAC ATCAAGGCTG CGGCGGCGAA GGTCAACGCT
GAGCTCGGTG TGATCAAGGA GGACATGGCC GAGGCGATCC GCGAGGCCGC GCTGGAGGTC
GCCGCGGGCA AGTGGAACGA CCAGTTCCCC GTGGACGTGT TCCAGACCGG GTCGGGCACG
TCCAGCAACA TGAACGCGAA CGAGGTCATC GCGACGCTGG CCACGGAGCG GCTGGGCCAG
CCGGTCCACC CCAACGACCA CGTCAACGCG TCCCAGTCGT CCAATGACGT GTTCCCGTCC
TCGATTCACA TCGCGGCGAC CTCCGCGCTG ATCAACGAGC TGATTCCGGC GCTGAAGCAC
TTGGAGGAGA CGCTGTCGGC GAAGGCGTCG GAGTTCGCCA CCGTGGTGAA GAGCGGCCGC
ACCCATTTGA TGGACGCGAC TCCGGTGACC TTGGGCCAGG AGTTCGACGG GTACGCCGCG
CAGGTGCGGT ACGGCATTGA GCGGATCGAA GCGTCCCTGC CGCGGGTCGC GGAGCTTCCG
CTGGGCGGTA CGGCCGTGGG GACCGGGATC AACACGCCGG AGGGCTTCTC CGCGAAGGTG
ATCGCGGAGA TTGCGCGGGC TACGGGGCTG CCGCTGACCA AGGCGCGCAA CCACTTCGAG
GCCCAGGGGG CGCGGGACGC TCTGGTGGAG CTGTCCGGTC AGCTGCGCAC GATCGCGGTG
AGCTTCTGCA AGATCGCCAA CGACATCCGG TGGATGGGTT CGGGTCCGCG GACCGGTCTC
AGCGAGATCT TCCTGCCGGA CCTGCAGCCG GGGTCGTCGA TCATGCCGGG CAAGGTCAAC
CCGGTGCTGT GCGAGTCGAT GCTCCAGGTG GCCTCGCAGG TGGTGGGGAA CGATGCCGCG
GTGGCGTTCG GCGGGTCGAC CGGCAACTTC GAGCTGAACG TGCAACTGCC GCTGATCGCC
CGCAACGTGC TGGAGTCGAT CCGGCTGCTG GCCAACATTT CCCGGGTGTT CGCGGACCGG
TGCGTGGCCG GGATCACCGC TAACGAGGAG CGGTGCCGCG AGTACGCGGA ATCGTCGCCG
TCGATCGTCA CCCCGCTCAA CCGCTACATC GGCTACGAGG AGGCCGCCAA GGTCGCCAAG
CAGGCGCTCG CGGAGCGGAA GACGATCCGC CAGGTGGTGA TCGAACGCGG GTACATCGCC
CAGGGCAAGC TGACCGAGGC CCAGTTGGAT GAGGCGCTCG ACGTGCTGGC GATGACCAAC
TCGCAGAAGT AG
|
|---|
| Protein sequence | MTEYRIERDS MGEVKVPVEA KWRAQTQRAV ENFPISGQGL EAAHIAALGH IKAAAAKVNA
ELGVIKEDMA EAIREAALEV AAGKWNDQFP VDVFQTGSGT SSNMNANEVI ATLATERLGQ
PVHPNDHVNA SQSSNDVFPS SIHIAATSAL INELIPALKH LEETLSAKAS EFATVVKSGR
THLMDATPVT LGQEFDGYAA QVRYGIERIE ASLPRVAELP LGGTAVGTGI NTPEGFSAKV
IAEIARATGL PLTKARNHFE AQGARDALVE LSGQLRTIAV SFCKIANDIR WMGSGPRTGL
SEIFLPDLQP GSSIMPGKVN PVLCESMLQV ASQVVGNDAA VAFGGSTGNF ELNVQLPLIA
RNVLESIRLL ANISRVFADR CVAGITANEE RCREYAESSP SIVTPLNRYI GYEEAAKVAK
QALAERKTIR QVVIERGYIA QGKLTEAQLD EALDVLAMTN SQK
|
|---|
| |