Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0446 |
Symbol | |
ID | 3579837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 506300 |
End bp | 506884 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637684134 |
Product | hypothetical protein |
Protein accession | YP_288507 |
Protein GI | 72160850 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCACC CGCACCCGTC GCCCGCTCAA CCCCCGTCGC CCTACCTGGG GCCTCCCCCG CCCCCGGGGC CTTTCCCGCA CGGGGCCTAC CCGCCTCCGC CCGGCGTGTT CCCGCAGCCG CCCGAGGTTG CCAGTTGGGG ACGGCGGGTC GCCGCTTTCC TCATCGACTC GGTCCTCGCG CAGGTGCTCA CTTTCGGGGT GATCCTTATC GGCGCCCTAG TCGCCGCACT GGTGGACAAC ATCGCCTATC CCGAATACAT CCACTCGGAC ACGATGAGCC CTGCCGCGAT CACCATCGTG CTCACGGCGC TGTTCGCCGC GTTCGCCACC GCCATCGCCT ACTGGTCGCT GCCGCACGCC AAGTGGGGAA AGACCATCGG CAAGTGGATG CTCGGCATCC GGGTGATCGC CGCGAACACG GGGACGCCCC CGTCCGTGGG CCGCGCGCTG GGGCGCTACT TCTTCTTCGC GCTGCTCTCG TTCCCCATGA TCACGTTCTT CGTCGACTGC CTGTGGCCGC TGTGGGACTC CCGGGGACAG TCCCTCCACG ACAAGGTCGC CGGAACCTAC GTCATCCGCG GCTAG
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Protein sequence | MTHPHPSPAQ PPSPYLGPPP PPGPFPHGAY PPPPGVFPQP PEVASWGRRV AAFLIDSVLA QVLTFGVILI GALVAALVDN IAYPEYIHSD TMSPAAITIV LTALFAAFAT AIAYWSLPHA KWGKTIGKWM LGIRVIAANT GTPPSVGRAL GRYFFFALLS FPMITFFVDC LWPLWDSRGQ SLHDKVAGTY VIRG
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