| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0436 |
|---|
| Symbol | |
|---|
| ID | 3579827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 493716 |
|---|
| End bp | 494939 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637684124 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_288497 |
|---|
| Protein GI | 72160840 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAG CCGTCATCGT CGCTACGGCA CGCTCTCCCA TCGGACGGGC TTTCAAGGGG
TCCCTCAAGG ACATCCGCCC GGACGACCTG ACCGCGCAGA TCATCTCCGC GGCGCTCGCC
AAGGTCCCGC AACTGGACCC CGCCACCATC GACGACCTCC TCCTGGGCTG CGGGCTCCCC
GGTGGCGAAC AGGGCTTCAA CATGGCCCGC GTCGTCGCGG TGCAGCTCGG TCTGGACTCG
GTCCCGGGCA CCACCATCAC CCGCTACTGC TCTTCATCCC TGCAGACCAC CCGGATGGCG
TTCCACGCCA TCAAGGCCGG GGAAGGCGAC GTCTTCATCT CCGCCGGCGT GGAAATGGTC
AGCCGCTTCA CCAAGGGCAA CAGTGACACG CTGCCCGACA CGAAGAACCC GCTGTTCGCC
GAGGCTGAGG CACGCACCGC CCGCCGCGCC GAGGGCGGTG CAGAACCCTG GCGCGACCCG
CGGGAAGAGG GCAAGCTCCC CGACATCTAC ATCGCTATGG GGCAGACCGC GGAGAACGTG
GCGCAGCTGC GCGGCGTCTC CCGCCAGCGC CAGGACGAAT TCGCGGTGCG TTCGCAGAAC
CTGGCGGAAA AGGCGCTCGA CAACGGTTTC TGGGAGCGGG AGATCACCCC GGTGACCCTG
CCTGACGGCA CGGTGGTCTC CACCGACGAC GGTCCGCGGC GCGGCACCAC CTACGAGAAA
GTCGCCGCCC TGGACCCGGT GTTCCGCCCC GACGGCACGG TGACCGCGGG GAACTGCTGC
CCGCTCAACG ACGGCGCGGC CGCACTGATC ATCATGAGCG ACCGGAAGGC CGCTGAACTG
GGCATCACCC CGCTGGCCCG GATCGTGTCG ACCGGGGTGA GCGCGCTGTC ACCCGAGATC
ATGGGGCTGG GACCGGTCGA GGCCTCCCGG CAGGCGCTGG CCCGCGCCAA CATGTCGATC
CGCGACATCG ACCTCGTGGA GATCAACGAG GCGTTCGCCG CGCAGGTGCT TCCGTCCGCG
GACGACCTGG GCATCGACAT CGACTCCCAG CTCAACGTCA ACGGCGGCGC CATCGCTATC
GGCCACCCGT TCGGTATGAC GGGGGCGCGG ATCACCACCA CGCTGATCAA CGCCCTCCAG
TTCCACGACA AGACCTTCGG CTTGGAGACC ATGTGCGTGG GCGGCGGGCA GGGAATGGCC
GCCATCTTCG AACGGCTGAG CTGA
|
|---|
| Protein sequence | MPEAVIVATA RSPIGRAFKG SLKDIRPDDL TAQIISAALA KVPQLDPATI DDLLLGCGLP
GGEQGFNMAR VVAVQLGLDS VPGTTITRYC SSSLQTTRMA FHAIKAGEGD VFISAGVEMV
SRFTKGNSDT LPDTKNPLFA EAEARTARRA EGGAEPWRDP REEGKLPDIY IAMGQTAENV
AQLRGVSRQR QDEFAVRSQN LAEKALDNGF WEREITPVTL PDGTVVSTDD GPRRGTTYEK
VAALDPVFRP DGTVTAGNCC PLNDGAAALI IMSDRKAAEL GITPLARIVS TGVSALSPEI
MGLGPVEASR QALARANMSI RDIDLVEINE AFAAQVLPSA DDLGIDIDSQ LNVNGGAIAI
GHPFGMTGAR ITTTLINALQ FHDKTFGLET MCVGGGQGMA AIFERLS
|
|---|
| |