| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0433 |
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| Symbol | |
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| ID | 3579824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 489647 |
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| End bp | 491275 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637684121 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase 1 |
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| Protein accession | YP_288494 |
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| Protein GI | 72160837 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00636325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCCG TGACCAACGT TCCCGCACCC GTCAACGAGC CGGTCCTGTC CTACGCGCCC
GGCAGCCCGG AACGCGCCGA ACTCACCCGC TACCTCACCG CACTCGCCGA CCAGCCCAGA
GAACTCCCCA TGACTATCGG CGGCACGCGG CGCCTCGGCG GCGGGGCACG CATCGACGTT
GTCCAACCGC ACCGCCACGC CTCCGTGCTC GGCATTCTCG GCAACGCCAC CCACGAGGAC
GCCCGGGACG CCATCGCCGC TGCCCTCCAC GCCGCCCCCG CGTGGCGGGA CACCCCCTTC
GACGAGCGGG CCGCGATCCT GCTGCGCGCC GCCGACCTCC TCTCCGGCCC GTGGCGGCAG
CGCCTCAACG CGGCAACCAT GCTGGGGCAG TCCAAGACCG TGATCCAAGC CGAGATCGAC
GCGGTCTGCG AACTCGCCGA CTTCTGGCGG TTCAACGTGC ACTTCGCCCG CCAGATCCTC
GCAGAACAGC CGCTCGTCCA CGCGCCGGGC ACGTGGAACC GCACCGACCA CCGCCCCTTG
GAAGGGTTCG TCTACGCGAT CACCCCGTTC AACTTCACGG CGATCGCCGG AAACCTCCCC
ACCGCGCCCG CGCTCATGGG CAACGTCGTG GTGTGGAAAC CGTCCCCCAC CCAGACGCTC
GCCGCCTGCC TGACCATGGA ACTGCTGGAA GCAGCCGGAC TGCCGCCCGG TGTCATCAAC
CTGGTCACCG GCGACGGCGT GGCGCTCTCC GAAGTCGCCC TCACCCACCC CGACCTGGCG
GGCATCCACT TCACCGGCTC CACCCGGACC TTCCAGTACC TGTGGCGGAC CGTCGGGGAG
AACATTGCCC GCTACCGCAG TTACCCGCGC ATCGTCGGAG AGACCGGCGG CAAAGACTTC
GTGGTCGCGC ACGCTTCCGC CGATGTCGAC GTGCTCCGCA CCGCCCTGCT GCGCGGTGCG
TTCGAATACC AAGGCCAGAA GTGCTCCGCT GCCTCCCGTG CCTTCATCGC CCGCTCGGTG
TGGGAGCGGA TGCGTGACGA CTTCCTCGCC CAGGTCGACG CGCTCCCCAT GGGCGACGTC
ACCGACTTCC GCAACTTCCT GGGCGCAGTC ATCGACCGCC GCGCCTACGA CCGCCTCGCC
CGCCTGCTCG ACCGGGTGCG CACGGATCCG ACGATCGACG TGCTCGTCGG CGGCACTGCC
GACGACAGCG TCGGCTACTT TGTGCGCCCC ACGGTCCTCC TCGGCAGCGA CCCGAGCCAC
GAGGTGTTCA CCACCGAGTA CTTCGGGCCG GTCCTCGCGG TCTACGTCTA CGACGACCAC
GCCTACGAGG AGGTGCTCCG CCTCGTCGAC CGCGGCGCAC CCTACGGGCT GACCGGCGCC
ATCATCGCCA CCGACCGGGC TGCGATCCTC GCGGCGACCC GGCAGCTGCG GTTTGCGGCG
GGCAACTTCT ACATCAACGA CAAGCCCACC GGGTCGATCG TGGGACAGCA GCCGTTCGGC
GGCTCCCGGG CCAGCGGCAC CAACGACAAG GCCGGGTCGA TGGCGAACCT CATGCGGTGG
ACCAGCCCGC GGGTGATCAA AGAAACATTC GTCCCGCCCA CCGACCACCG CTACCCGCAC
CAGGACTGA
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| Protein sequence | MDAVTNVPAP VNEPVLSYAP GSPERAELTR YLTALADQPR ELPMTIGGTR RLGGGARIDV
VQPHRHASVL GILGNATHED ARDAIAAALH AAPAWRDTPF DERAAILLRA ADLLSGPWRQ
RLNAATMLGQ SKTVIQAEID AVCELADFWR FNVHFARQIL AEQPLVHAPG TWNRTDHRPL
EGFVYAITPF NFTAIAGNLP TAPALMGNVV VWKPSPTQTL AACLTMELLE AAGLPPGVIN
LVTGDGVALS EVALTHPDLA GIHFTGSTRT FQYLWRTVGE NIARYRSYPR IVGETGGKDF
VVAHASADVD VLRTALLRGA FEYQGQKCSA ASRAFIARSV WERMRDDFLA QVDALPMGDV
TDFRNFLGAV IDRRAYDRLA RLLDRVRTDP TIDVLVGGTA DDSVGYFVRP TVLLGSDPSH
EVFTTEYFGP VLAVYVYDDH AYEEVLRLVD RGAPYGLTGA IIATDRAAIL AATRQLRFAA
GNFYINDKPT GSIVGQQPFG GSRASGTNDK AGSMANLMRW TSPRVIKETF VPPTDHRYPH
QD
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