| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0410 |
|---|
| Symbol | |
|---|
| ID | 3580009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 461805 |
|---|
| End bp | 462710 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637684096 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_288471 |
|---|
| Protein GI | 72160814 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.616027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGGT TTGCTTGGAT ATGTACCGCC GCAGCAGTAG CCCTGCTGGC CGCAAGCTGC
AGCTCCGAAG ACAACAACGC AGCGGAGATG CAGTACTACC TGTCGCTGGG TGATGGTCTG
ACAGTCGGAG CCCAGCCTGA CGACTCGGGC GACGTCCTCG AAACCGCCAC GGGCTACACC
AACCTGGTGG CCTCAGCCCT GTCAAAGGAG CCTCCGGGGG TGCAGCACGT CAACCTGGGG
TGCATCGGAG AGACCACCAT CACCTTCCTC AGCGGTGGCG CTGAAGGCTG CGAATACGAC
GAGGGCTCGC AGCTGGACGC CGCCGTGGAG TTCCTGGAGC AGCACAAGGG CAAGGTGCGC
CTCATCACGA TCAGCATCGG CGGCGAGAAC CTGTTCTCGT GCGCCCGGGA CGAGGACGGC
GCGCTGACCA CCGACATCGA CCGGGAGTGC GTCTCCGAAA ACCTGCAGAA GGTCTCCGAG
GACGCGCCGA TCATCGCCCA GCGGCTGCGG GAAGCCGCGG GCGACGACGT CGAAATCATC
GCGCTCACCG CCTACAACCC GCTGCTCGCG ATGTACCTGC AGGAAGAGGT GACCGAGGTC
GTCGCCACGG AGGACGACGA CGAGCGCACC TACCAGGACA CCGCCAACTA CACCAACGGC
ATGCTGGCCG CGATCAACGG CACCCTCAAC GACGCCTACA ACGCCGAGAA CATCACCGTG
GCGAACGTGG CCACGCTGTT CGACGTGGAC AACTTCGAAG AGAACGACGA CGGCACGCCC
GCCAACGTCC ACAACGTGTG CCAGTACACG TGGATGTGCG ACACCGAGCG CGGCCCGGAC
ATCCACCTCA ACCAGGAAGG GGCTCAGGAG GTCGCCACCC TCGTCCAGGA CGTGATGCGG
GAGTAG
|
|---|
| Protein sequence | MRRFAWICTA AAVALLAASC SSEDNNAAEM QYYLSLGDGL TVGAQPDDSG DVLETATGYT
NLVASALSKE PPGVQHVNLG CIGETTITFL SGGAEGCEYD EGSQLDAAVE FLEQHKGKVR
LITISIGGEN LFSCARDEDG ALTTDIDREC VSENLQKVSE DAPIIAQRLR EAAGDDVEII
ALTAYNPLLA MYLQEEVTEV VATEDDDERT YQDTANYTNG MLAAINGTLN DAYNAENITV
ANVATLFDVD NFEENDDGTP ANVHNVCQYT WMCDTERGPD IHLNQEGAQE VATLVQDVMR
E
|
|---|
| |