| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0407 |
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| Symbol | |
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| ID | 3580006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 458401 |
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| End bp | 459324 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637684093 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_288468 |
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| Protein GI | 72160811 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.44601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGCCC CGACTTCCGT CACCGTGCGG GTCCCCGCGA AGGTGAACTT GCGGCTTGCC
GTGGGGCCGG TCCGCGGCGA TGGATACCAC GGCTTGGTCA ACGTCTTCCA CGCGGTCTCG
CTCTACGACG AGGTTACCGT TTCTCCCCGC TCCGACCTTG CGCCCGGACA GGCGGTGCTC
AGTGTGGACG GGGAGCGACC GGACCACGTG GCCCGCGTGC CCCTCGACGA CAGCAACCTC
GCGGCGCGCG CCGCCGCCCT GCTGGCCCGC CACGTGCCCC ACGCCACCGG GGTGCACATC
CACGTGCACA AGGCCATTCC TGTGGCCGGT GGCATGGCTG GGGGAAGCGC TGATGCGGCT
GCCGCGCTCG TGGCGTGCGA TGCGCTCTGG GAAGGCGGCA CCCCCCGCGA GCGGCTGCTG
GAGCTGGCCG CAGAGCTCGG CAGCGACGTC GCCTTCCCGT TGATCGGCTG CACCGCGGTG
GGCACCGGGC GCGGCGAGCA GCTCTCCCCG CTCCCCGTCC AGGGGACGTT CCACTGGGTG
TTCGCCCTCG TCGACGGGGG CCTGTCCACG ACGAAAGTAT TCGCGGAATA CGACCGGCTG
CGACCGGACG CCCCCGAGCC CACGCTCGAC GACGCGCTAG TCGCCGCGCT CGCCGCCGGG
GACGCCCGTC GGCTGGGTGC GGCACTCACC AACGACCTCC AGCCAGCCGC CTTGGCGCTC
CGCCCCGAAC TGGGGGACCT CCTTGAGGCG GGCCGTGCCG CGGGAGCGCT GGGCGCCCTC
GTGTCCGGCT CCGGACCCAC GTGTGCGTTC CTCGCCGAGT CGGCGGACCA CGCCCGCGAG
CTTGCCGCTG CCTTGCGCGC GAGCGGCACG TGTGCGGACA CGGTGACCGC CCACGGCCCG
GTCCCCGGCG CCACCGTGGT GTAG
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| Protein sequence | MNAPTSVTVR VPAKVNLRLA VGPVRGDGYH GLVNVFHAVS LYDEVTVSPR SDLAPGQAVL
SVDGERPDHV ARVPLDDSNL AARAAALLAR HVPHATGVHI HVHKAIPVAG GMAGGSADAA
AALVACDALW EGGTPRERLL ELAAELGSDV AFPLIGCTAV GTGRGEQLSP LPVQGTFHWV
FALVDGGLST TKVFAEYDRL RPDAPEPTLD DALVAALAAG DARRLGAALT NDLQPAALAL
RPELGDLLEA GRAAGALGAL VSGSGPTCAF LAESADHARE LAAALRASGT CADTVTAHGP
VPGATVV
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