Gene Tfu_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0405 
SymbolksgA 
ID3580004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp455398 
End bp456261 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID637684091 
Productdimethyladenosine transferase 
Protein accessionYP_288466 
Protein GI72160809 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGAAT CCGACAGCGC TGATGCCCGC CTGCTCACCC CCGCAGACGT GCGGCGGCTC 
GCCGCCCAGT TGGGGATACG CCCCACCAAG ACCCTCGGGC AGAACTTTGT CATCGACCCC
GGAACCGTGC GCCGCATCGT GCGTGCCGCC CAGGTCAGCC CCGACGACGT CGTGGTCGAG
GTCGGTCCCG GCCTCGGCTC GCTCACCCTG GCCCTGCTGC CGCACGTGCG GCACGTCACC
GCGGTAGAGA TCGATCCGCG GCTCGCCGAG GCGCTGCCCG GCACGGTCGC CGACCACGCA
CCCGCCTACG CCCACCGGCT CCGGGTGGTC ACCGCTGACG CGCTGCGGAT CACAGAACTT
CCCGACCCGC AGCCCACCGC GCTCGTCGCG AACCTCCCCT ACAACGTGGC GGTCCCCGTC
GTCCTGCACC TGCTGAACCT GCTGCCCAGC CTGGAGCACG GCCTGGTCAT GGTGCAGGCG
GAAGTCGCGG AGCGGCTGGC TGCCCGGCCC GGCGACCGCG CGTATGGCGC CCCGTCAGCG
AAGATCGCCT GGTATGCCGA CGTCCGCCGG GCCGGGGCGA TCGGCCGCAC CGTGTTCTGG
CCGGTGCCCA ACGTCGACTC CGGTCTGGTC GCGCTGCGGC GCCGTCCCGC ACCCCCCACG
AAAGCCAGCC GCGAAGACGT CTTCGCTGTC GTCGACGCGG CGTTCGCGCA GCGCCGCAAA
ACCCTGCGCG CTGCCCTCAG CTCCTGGGCG GGCTCGGCCG CGGCCGCAGA GGCTGCGCTG
CGCAGTGCGG GCGTGGACCC GCGGAGCCGC GGTGAGACCC TGGGGATCGC CGACTTCGCC
CGGATCGCGG AGCACCGGCC CTGA
 
Protein sequence
MTESDSADAR LLTPADVRRL AAQLGIRPTK TLGQNFVIDP GTVRRIVRAA QVSPDDVVVE 
VGPGLGSLTL ALLPHVRHVT AVEIDPRLAE ALPGTVADHA PAYAHRLRVV TADALRITEL
PDPQPTALVA NLPYNVAVPV VLHLLNLLPS LEHGLVMVQA EVAERLAARP GDRAYGAPSA
KIAWYADVRR AGAIGRTVFW PVPNVDSGLV ALRRRPAPPT KASREDVFAV VDAAFAQRRK
TLRAALSSWA GSAAAAEAAL RSAGVDPRSR GETLGIADFA RIAEHRP