Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0405 |
Symbol | ksgA |
ID | 3580004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 455398 |
End bp | 456261 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637684091 |
Product | dimethyladenosine transferase |
Protein accession | YP_288466 |
Protein GI | 72160809 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCGAAT CCGACAGCGC TGATGCCCGC CTGCTCACCC CCGCAGACGT GCGGCGGCTC GCCGCCCAGT TGGGGATACG CCCCACCAAG ACCCTCGGGC AGAACTTTGT CATCGACCCC GGAACCGTGC GCCGCATCGT GCGTGCCGCC CAGGTCAGCC CCGACGACGT CGTGGTCGAG GTCGGTCCCG GCCTCGGCTC GCTCACCCTG GCCCTGCTGC CGCACGTGCG GCACGTCACC GCGGTAGAGA TCGATCCGCG GCTCGCCGAG GCGCTGCCCG GCACGGTCGC CGACCACGCA CCCGCCTACG CCCACCGGCT CCGGGTGGTC ACCGCTGACG CGCTGCGGAT CACAGAACTT CCCGACCCGC AGCCCACCGC GCTCGTCGCG AACCTCCCCT ACAACGTGGC GGTCCCCGTC GTCCTGCACC TGCTGAACCT GCTGCCCAGC CTGGAGCACG GCCTGGTCAT GGTGCAGGCG GAAGTCGCGG AGCGGCTGGC TGCCCGGCCC GGCGACCGCG CGTATGGCGC CCCGTCAGCG AAGATCGCCT GGTATGCCGA CGTCCGCCGG GCCGGGGCGA TCGGCCGCAC CGTGTTCTGG CCGGTGCCCA ACGTCGACTC CGGTCTGGTC GCGCTGCGGC GCCGTCCCGC ACCCCCCACG AAAGCCAGCC GCGAAGACGT CTTCGCTGTC GTCGACGCGG CGTTCGCGCA GCGCCGCAAA ACCCTGCGCG CTGCCCTCAG CTCCTGGGCG GGCTCGGCCG CGGCCGCAGA GGCTGCGCTG CGCAGTGCGG GCGTGGACCC GCGGAGCCGC GGTGAGACCC TGGGGATCGC CGACTTCGCC CGGATCGCGG AGCACCGGCC CTGA
|
Protein sequence | MTESDSADAR LLTPADVRRL AAQLGIRPTK TLGQNFVIDP GTVRRIVRAA QVSPDDVVVE VGPGLGSLTL ALLPHVRHVT AVEIDPRLAE ALPGTVADHA PAYAHRLRVV TADALRITEL PDPQPTALVA NLPYNVAVPV VLHLLNLLPS LEHGLVMVQA EVAERLAARP GDRAYGAPSA KIAWYADVRR AGAIGRTVFW PVPNVDSGLV ALRRRPAPPT KASREDVFAV VDAAFAQRRK TLRAALSSWA GSAAAAEAAL RSAGVDPRSR GETLGIADFA RIAEHRP
|
| |