Gene Tfu_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0344 
Symbol 
ID3580017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp386990 
End bp388429 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content71% 
IMG OID637684028 
Productsignal transduction histidine kinase 
Protein accessionYP_288405 
Protein GI72160748 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCTG CCGCTGCCCT AGGGGAGAAG GTCCGCGGCT GGGTCCGCGG GCTCGGGGGT 
GCCAGTCTCG GCACCCGGTT CGCGGTGACG TTTGCCGCGG TCGCTGCCGC GGTGATCGTG
CTGATGGGGT CGCTCGCCTA CAGTGCTGCC GCCACCCTGA TCCGCAACAG TGCGGAACAG
GAGTTCAACG CCACCGTCTC CAACGTCGCC CAGACGCTGC GGAACTCGTC GACCGGCAAC
AGCCGGTTCC ACGAGTTCAC CCTCGTCCAC TCGGAGAGGT TCTCGTTCCA GCTCATCAAC
GGGGCGGGCG AGATCATGGT GCCGCTGGGC GGCGGCCGCG CTTCGGCTCC GCTGCCGGTC
ACCGAAGCCG ACCGCGCTGT GGCCGGGCAC TACGCTGGCG GGCTGGTCCA CTTGCGGGAC
GACAATGCGC TCGGGGAGCC GCTGCGCGTG GCCACCGTCT CCTTCGGCCA AGGGCTGGGC
GCGGTGCAGA TCGTGCAGCG CCTGCAACCG ACCGAGCGGC TGCTGGACAC TCTGGCCGCG
CAGTTGGTGG TGGTCGGCGT GGTGGCGCTT GTCGGTGCCG GACTCGCCGG CTGGCTGGTG
GCGCGTCGCA TCACCAGCCG CCTGGTGCGG TTGACTGAAG CCGCCGAATA CGTCACGTCC
ACGGGGCGGC TGGACCGGGC CGTCTCGGAC GGCGGGACCA GTACGGGAGG CCGGGACGAG
GTGGGACGGC TCGGCGCCGC GTTCAACGAG ATGCTGGGCA GGCTGGCCGC CGCGAAAGAA
GAGCAGCGGC GGCTGGTGCA GAACGCTTCC CACGAGCTCC GCACCCCCCT GACCAGCCTG
CGGACCAACG TCAGTGTGAT GAAGCAGTTC GACCGGCTCT CCCCGGAAGC GCAGCAGCGG
CTCGTCGACG ACCTGCAAGG GGAGACCCGG GAGCTGACCG ACCTGGTCAA CGAGCTGGTC
AGCCTGGCGA CCGAGACCTA CCAGGACGAG CCGGTCCAAG AAGTCGTGCT GCGGGAGGTC
GCGGAGCGGG TAGCGGCGCG CAGCCGCCGC CGCACCGGCC GGGAGATCAT TGTGGACGCG
GACGACAGCG CGGTGCTGGG GCGGCCTGGT GCGTTGGAGC GCGCGATCTC CAACCCGGTG
GAGAACAGCG CCAAGTTCGA CCCGGAGGGC ACGGCCCCGA TCGAGATCCA CATCCGCGAC
GGGGTGGTGG AGGTCCGGGA CCGGGGGCCC GGGATCGCGG AATCCGAGCT CGCTCACATC
TTCGAACGCT TCTACCGTTC CCCGGCCGCG CGCGGCCTGC CCGGCTCCGG GCTCGGCCTG
TCCATGGTCC ACGACATTGC GGCTGCCCAC GGCGGCACCG TGTTCGCCTA CAACCGGGAG
GGCGGCGGCG CGGTGATCGG CATGCGGCTG CCGACGATCC CCGACGAACC GCCGCAGTGA
 
Protein sequence
MGAAAALGEK VRGWVRGLGG ASLGTRFAVT FAAVAAAVIV LMGSLAYSAA ATLIRNSAEQ 
EFNATVSNVA QTLRNSSTGN SRFHEFTLVH SERFSFQLIN GAGEIMVPLG GGRASAPLPV
TEADRAVAGH YAGGLVHLRD DNALGEPLRV ATVSFGQGLG AVQIVQRLQP TERLLDTLAA
QLVVVGVVAL VGAGLAGWLV ARRITSRLVR LTEAAEYVTS TGRLDRAVSD GGTSTGGRDE
VGRLGAAFNE MLGRLAAAKE EQRRLVQNAS HELRTPLTSL RTNVSVMKQF DRLSPEAQQR
LVDDLQGETR ELTDLVNELV SLATETYQDE PVQEVVLREV AERVAARSRR RTGREIIVDA
DDSAVLGRPG ALERAISNPV ENSAKFDPEG TAPIEIHIRD GVVEVRDRGP GIAESELAHI
FERFYRSPAA RGLPGSGLGL SMVHDIAAAH GGTVFAYNRE GGGAVIGMRL PTIPDEPPQ