Gene Tfu_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0316 
Symbol 
ID3579989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp354564 
End bp356099 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content68% 
IMG OID637684000 
Productprecorrin-2 C20-methyltransferase / precorrin-3 methyltransferase 
Protein accessionYP_288377 
Protein GI72160720 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1010] Precorrin-3B methylase
[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR01466] precorrin-3B C17-methyltransferase
[TIGR01467] precorrin-2 C20-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCA CCCCCGGCCG CCTGTACGGC GTCGGCCTAG GTCCTGGAGA CCCGGAATTC 
ATCACCCGCA AAGCAGCCCG ACTGATTGCC GAAGCCGACG TCATCGCCTA CTACTCAGGG
ACACACGGCC GCTCTATCGC CCGATCTATT GCCGCAGATG TGATCCCGGA GGGAGTGATC
GAGGAGAAAC TCGTCTACCC GGTGACGACC GGAACCACGG ACCATCCGGG CGGCTACGAG
GGCGCCATCA CCGAGTTCTA CGACGCGTCC GCCCAACGGC TCGCCGCCCA CCTGTCACAA
GGGCGGGACG TCGTGGTGCT GTGTGAGGGC GACCCGCTGT TCTACGGCTC GTACATGTAC
CTGCACGACC GGCTGGCCTC CCGGTTTCCC ACCGAGATCG TCCCCGGTGT GACGTCGATA
TCCGCGGCTT CTGCTGCGGC GGCGTGCCCG CTCGTGCGCC GCACCGACGT GTTGACGATC
CTCCCAGGGA CCCTGCCCCC ACCCGAGCTG GCCCGGCGAC TGGCCGACAC TGACGCTGCC
GCAGTACTGA AGCTCGGCCG CCGCACCTTC GCCGGTGTGC GCGAGGCGCT AGCCCAGGCA
GGGCGACTGG AGGACGCTGT CTACGTGGAA CGCGCCTCCA TGGCTGAACA GCGGATACTT
CCAGTAGGGG ACGTAGCTTC CGACGATGTC CCCTATTTCT CGCTGATTCT CAGCTCCGGG
GACAGCACGC CACGCAACCG GAGACCGCGA GGCAGAGTCC GTGCACCGCA GCGCACCCCA
GCCCCCCATC ATCCGGACTC GCCCGCCGAA CTACTCGTGG TGGGTCTCGG CCCCGCTGGC
GAGCAGTGGC TGACCCCGGA AGCAGCGCAG GCGCTCGCCA ACGTCGACCA CGTGGTCGGC
TACGGCCCGT ACGTGGACCG CGTTCCGGTG CGTCCCGGTC AGCAGCGGCA CTCCAGCGGC
AACACGGTCG AATTGGATCG GGCCCGGTTC GCTCTTGACC TGGCCTTAGC CGGGGAGCGG
GTGGCCGTGG TCTCAGGCGG GGACGCTGGC GTGTTCGGGA TGGCCTCGGC GGTCTTCGAA
GCGGCCCAGG ATCCCCGCTA CGCGGACGTT CCTGTGCGGG TACTGCCAGG GCTGACCGCG
GTGCAAGCAG TGGCGGCACG AGCGGGCGCG CCCATTGGCG GGGATTTTGC GGTGCTGAGC
CTGTCCGACC GGCTCAAACC GTGGGAGGTG ATCGAAGCCC GGTTGGAGGC GGCAGCCCGC
GCCGACTTAG TGCTGGCGAT CTACAACCCT GCGTCCCGTT CCCGGCGCAC CCAGGTGGCG
CGAGCCCGCG ACGTCCTGTT GCGACACCGG CGGGACAACA CCCCGGTGGT GGTCGGCCGT
GACGTGGGCC GCGAGGGCGA GTCGGTGGAG GTCACCACGC TGGGAAAGCT CGACCCGGAA
GGCATCGACA TGCGGTGCCT GCTCATCGTG GGCTCCTCCA GCACCTCCGT GACGGCTGCG
GGAGCGGTGT GGACACCGCG GTTTGTGGCG GAATAG
 
Protein sequence
MSSTPGRLYG VGLGPGDPEF ITRKAARLIA EADVIAYYSG THGRSIARSI AADVIPEGVI 
EEKLVYPVTT GTTDHPGGYE GAITEFYDAS AQRLAAHLSQ GRDVVVLCEG DPLFYGSYMY
LHDRLASRFP TEIVPGVTSI SAASAAAACP LVRRTDVLTI LPGTLPPPEL ARRLADTDAA
AVLKLGRRTF AGVREALAQA GRLEDAVYVE RASMAEQRIL PVGDVASDDV PYFSLILSSG
DSTPRNRRPR GRVRAPQRTP APHHPDSPAE LLVVGLGPAG EQWLTPEAAQ ALANVDHVVG
YGPYVDRVPV RPGQQRHSSG NTVELDRARF ALDLALAGER VAVVSGGDAG VFGMASAVFE
AAQDPRYADV PVRVLPGLTA VQAVAARAGA PIGGDFAVLS LSDRLKPWEV IEARLEAAAR
ADLVLAIYNP ASRSRRTQVA RARDVLLRHR RDNTPVVVGR DVGREGESVE VTTLGKLDPE
GIDMRCLLIV GSSSTSVTAA GAVWTPRFVA E