Gene Tfu_0314 details

Gene Information

• Locus tag: Tfu_0314
• ID: 3579987
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 352324
• End bp: 353541
• Gene Length: 1218 bp
• Protein Length: 405 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637683998
• Product: precorrin-6Y C5,15-methyltransferase (decarboxylating)
• Protein accession: YP_288375
• Protein GI: 72160718
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2241] Precorrin-6B methylase 1; [COG2242] Precorrin-6B methylase 2
• TIGRFAM ID: [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; [TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACAC CGGTCACTGT CGTCGGCATA GGCGCTGATG GCTGGGAAGG GTTGCCGCCG 
GCGTCCCGCG ACGCTATCCG CGAAGCCCAG GTACTCCTCG GCGGTACTCG ACATTTGGCT 
TTGGTGCCCG ACACGGGAGC GGTACGCGAA CCGTGGCCGT CCCCGTTGCT GAGCGGTCTT 
CCAATGCTCC TGGACCGGTA CCGTGACCGC CGTGTCGTCG TGCTGGCTTC CGGGGACCCC 
CTCCTGTCGG GGATCGGCAC CACCCTGGTG CGACTGCTCG GCGCAGACCG GGTGCGGGTG 
CTGCCCGCGG TGAGCTCGGT CGCCCTGGCC CGGGCACGGA TGGGGTGGAG CGCGGAGTCT 
GTGGATGTGG TGACGCTCGT GGGACGCGAC GTCGACGCGG TGCGCCGCTA CCTCACCCCC 
GGGCGGCGGC TGGTGGTGCT CTCCTCGGAT GGGACGACGC CTGCCGCGGT CGCAGCCCGG 
CTGGTCGAAC ACGGCCTTGG CGATAGCCGC ATGACGGTCC TGTCCGACCT GGGGAGCAGC 
AGAGAGGAAC GGATCGAAGC CACCGCGGCC GAGTGGCGGG GCCGGGACGC GCCGCCGTTG 
AACGTGGTGT GCGTGGCGGT CACCGGAAAC GGTGGGTACC CGCTTACCCC CGGGCTGCCG 
GATGAGGCGT TCGACCACGA CGGGCAGCTC ACCAAACGAG AGATACGGAT TGCCGCGGTC 
TGTGCGCTCC GCCCCCAACC CCAGGCCCTG CTGTGGGATG TGGGAGCGGG AGCAGGGTCG 
GTGGCCGTGG AATGGCTGCG CGCCGACCCG CGGTGCCGGG CTGTTGCGAT TGAGCGGCAC 
CCCGAACGGG TGCACCGGAT CACGCGTAAC GCTGCCCGGC TTGGTGTGCC CTCCCTGCGC 
GTGGTCCACG GTAGTGCGCC TGACGCGCTG AGCGGACTGG AGCCACCCGA TGCGGTGTTC 
GTCGGTGGTG GGGCTACCGA CCCGTCCGTG CTGGACCGGT GCTGGGCGGC CCTGCGGCCC 
GGGGGCCGCA TCGTAGTGCA CGCCGTGACT TTGGAGACGG AAGCAGTCTT GGTGGAACGG 
TGGCGGCGCC ACGGCGGAGA GTTGACACGC CTCTCGGTGG AACGGGCTGC CCCCCTGGGG 
TCGTTCACGG GATGGCGTCC GGCCCGTCCG GTTGTCCAGT GGGCCGCGAC CAAAACAGAT 
CAGGGAAGAG AGACATGA 

 

Protein sequence

MKTPVTVVGI GADGWEGLPP ASRDAIREAQ VLLGGTRHLA LVPDTGAVRE PWPSPLLSGL 
PMLLDRYRDR RVVVLASGDP LLSGIGTTLV RLLGADRVRV LPAVSSVALA RARMGWSAES 
VDVVTLVGRD VDAVRRYLTP GRRLVVLSSD GTTPAAVAAR LVEHGLGDSR MTVLSDLGSS 
REERIEATAA EWRGRDAPPL NVVCVAVTGN GGYPLTPGLP DEAFDHDGQL TKREIRIAAV 
CALRPQPQAL LWDVGAGAGS VAVEWLRADP RCRAVAIERH PERVHRITRN AARLGVPSLR 
VVHGSAPDAL SGLEPPDAVF VGGGATDPSV LDRCWAALRP GGRIVVHAVT LETEAVLVER 
WRRHGGELTR LSVERAAPLG SFTGWRPARP VVQWAATKTD QGRET