Gene Tfu_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0298 
Symbol 
ID3578895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp336271 
End bp336903 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content66% 
IMG OID637683982 
ProductCu resistance protein CopC 
Protein accessionYP_288359 
Protein GI72160702 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCCT TCTCCGCCTC ATCCCCCGGC GGTCGCATCA TCGCGCTGGT GACAGGTCTA 
CTCACCGCCC TGGCTCTGTC CCTGGGGGTC GCCCCCACGG CACACGCGCA CAACACCCTC 
GTCTCCTCGT CCCCCGAGGA CGGGGCCACC CTCGACTCTC TCCCCGAGAA GGTAGTGCTG 
ACCTTCAACG CGGAAGTGCT GGAGGGAGGC AACGGGATCG TCGTCACCGG CCCGGACGGC 
ACCAACTACG CCTCTGGTGA TGTCGTCATC GACGGGGTGG AAGCCTCCAT CGACCTGGAA 
CCGCTCACCC AGCCCGGCGA ATACACCGTC GAATACCGGA TCATCTCCGC CGACGGCCAC 
CCGCTTTCGG ACACCTTCAC GTTCACCGTG GACGAGTCCG CTATCCCCGA GCCCACCGAG 
AGCCCGGCTG CTGAACAACC TGAAGAAGAG GAGCCCACGC CTGCCCCTGC GGAAACTGAA 
GGGACGGAGT CCGAGGACAG CACCTCGACA ACCGGCGTGG GTCTTTCCGG TCCGCTCGGA 
GCGATCCTGG GAATCGTCCT GGGAATCGGC GTCATCGCGG TGATCGCAAT CACCATCATC 
CGCCTGCGCC GCCGTCCTGG CTCCGGAGAC TGA
 
Protein sequence
MSAFSASSPG GRIIALVTGL LTALALSLGV APTAHAHNTL VSSSPEDGAT LDSLPEKVVL 
TFNAEVLEGG NGIVVTGPDG TNYASGDVVI DGVEASIDLE PLTQPGEYTV EYRIISADGH 
PLSDTFTFTV DESAIPEPTE SPAAEQPEEE EPTPAPAETE GTESEDSTST TGVGLSGPLG 
AILGIVLGIG VIAVIAITII RLRRRPGSGD