| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0294 |
|---|
| Symbol | |
|---|
| ID | 3578891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 332307 |
|---|
| End bp | 332678 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637683978 |
|---|
| Product | anti-sigma factor antagonist |
|---|
| Protein accession | YP_288355 |
|---|
| Protein GI | 72160698 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGG AATTCGATAT TGCGACCAGG ACTGAGGGGG ACGTGGTCGT TGTCGCCCCC
AAGGGAGACC TGGATGCCGG CACTTCCCAG GTGTTGGCTG AGACCCTGGA GACCGTGATC
GGGGCAGAGG AGTCCTGCCG GGGGATCGTC CTGGACTTCT CCGAGGTGGC GTCCTGCGAT
TCCCGGTGCA TCGGCGTGCT GCTCGCCAGC TACCGGCATG CCCGAGACCG CGGAATCGGC
CTGGTGGTGG CCTCTTCCCA GGGAATGGTG CGGCGACTGC TCATGATCGC GGGCATTGAC
CAGGTGATCG CCTTGGAAGA AGATGTGGCG CGCGCGGTCG CGGGGATGCG TGCCGCGGAA
GCACCGCGGT GA
|
|---|
| Protein sequence | MSAEFDIATR TEGDVVVVAP KGDLDAGTSQ VLAETLETVI GAEESCRGIV LDFSEVASCD
SRCIGVLLAS YRHARDRGIG LVVASSQGMV RRLLMIAGID QVIALEEDVA RAVAGMRAAE
APR
|
|---|
| |