| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0291 |
|---|
| Symbol | |
|---|
| ID | 3578888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 328804 |
|---|
| End bp | 329778 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637683975 |
|---|
| Product | ABC-type multidrug transport system ATPase component |
|---|
| Protein accession | YP_288352 |
|---|
| Protein GI | 72160695 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA CGTCTCAGAA CCGCAGCGTC GCCATCCACG TGAGCGACCT CCACCAGTCC
TACGGCAGTT TCGAAGCTGT CCGGGGCGTC TCGTTCACGG TCGCCCCCGG CGAACTGTTC
GCCCTCTTGG GCACCAACGG AGCAGGGAAA ACCACCACGA TCGAAACCCT CGAAGGCTTC
CGCCGCCCCA CTCGCGGGTC GGTGCGGATC TTCGGGATCG ACCCGTTCGG CCAGCCTCCG
GAGCTGCGTC CCCGGGTCAA CGCGGTCCTC CAGCACAGTG GACTGTTCGA AGAGCTCACC
GTCACGGAGA GCATCGAACT GGCCCGGGAC CTGGCGGACG ACCCCATGGA CACCGCCGAA
GTGCTGGAGG CCGTGGTGCT GGCCGACAAA GCCCGGAACA CGGTCCGCTC GCTGTCCGGT
GGAGAACGGC GCCGCCTCGA CCTGGGGCTA GCGATTCTCA CCCGCCCCGA CGTGCTCTTC
CTCGACGAGC CCACCACCGG CATGGACCCG GAAATGCGCC GGGAAACCTG GAAGATCATC
AGCAGCCAGG TGGCGCGCGG CGCAGCTGTC GTACTCACCA CGCACTACCT GGAGGAAGCA
GAACGGCTCG CCGACCGGCT CGCCATCATG CACCGCGGGG AAATCCGGGT CTCGGGCACG
GTCAGCGAAG TGGTCTCCCA GTGGGGCGAC CGGATCAGCT TCCGTCTGCC CTCCCACATC
CGCTCCCGGG AACTGCCGGA GCTCCCCGGG GCTGAACTCA CCATCGACGT CCGCGGCGAC
CACCAGTGGG CGGTGTACAC GGTCACCACC GGCACTGACC CCGCGACCCG CACCCACCAC
GCACTCCTCC CCCTCCTGAA GTGGGCAGAA GAGCGCTCTT TGGACCTTGA ACGGCTGGAG
TCCCGTCCCG CCTCCCTCGA AGACGTGTTC CTCGCCGTCG CGCAAGGAGA CGTCACCGAC
CTGGTGGACC TCTGA
|
|---|
| Protein sequence | MNTTSQNRSV AIHVSDLHQS YGSFEAVRGV SFTVAPGELF ALLGTNGAGK TTTIETLEGF
RRPTRGSVRI FGIDPFGQPP ELRPRVNAVL QHSGLFEELT VTESIELARD LADDPMDTAE
VLEAVVLADK ARNTVRSLSG GERRRLDLGL AILTRPDVLF LDEPTTGMDP EMRRETWKII
SSQVARGAAV VLTTHYLEEA ERLADRLAIM HRGEIRVSGT VSEVVSQWGD RISFRLPSHI
RSRELPELPG AELTIDVRGD HQWAVYTVTT GTDPATRTHH ALLPLLKWAE ERSLDLERLE
SRPASLEDVF LAVAQGDVTD LVDL
|
|---|
| |