| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0281 |
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| Symbol | |
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| ID | 3578878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 314100 |
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| End bp | 315338 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637683965 |
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| Product | putative polyamine-binding lipoprotein |
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| Protein accession | YP_288342 |
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| Protein GI | 72160685 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.565719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTAGAA AACACACCAT CAATCCTGCT GTGCTGCGTG GCTTCACCCA GCGTCGTGTG
AGCCGCCGCG ACACCTTCAA ACTCGCTGGT CTTTCCGCTG CCGCCCTGGC GCTCGCCGGC
TGCGGTATCG AGGGACAGGG CCAGCAGTCC ACCACCTCGG AGAACTTCTG GAACGGGAAG
GAAAGCAACG GCAAAGTCCG CTTCGTCAAC TGGCCGCTCT ACATGGACCC CGAAAAGCCG
GAGCTCAAGC GGTTCACCGA GCAGACCGGC ATCGAGGTCG AATACAGCGA GGCCATCCAG
GACATGCCGT CGTGGTTCGG AGAGATCCAG CCGCTCCTGG CCAACGGCGA CGACATCGGC
GCCGACCTCA TGGTCATCAG CAACGGGCAG GAGCTCACCA AGCTCATCGC ACTGGGCTAC
CTCGCCCCGC TGAAGCGCGA CCAGTTGACG AACTTTGCCG AGTTCGCCGA CGAGTTCTAC
ACGATGTCGG CCTACGACTA CGGCAACCAG TACACCGTTC CCTACGCCTC GGGGATCACC
GGCATCGCCT ACGACCCCGA ACGGGTCGGA CGCGAAATCA CCTCCATCAA GGACCTGTGG
GACCCCGAGT TCAAGGGACG GGTCGGCATG ATGCGCGACC CGCAGGAGAT CTCCAACTTC
GCGCTGCTCT ACAACGGTGT CGCTCCGGAA GACTCCACCC CCGAGGACTG GGAAGCCGCT
GCCGAAGTCC TGAAGAAGCA GCGCGACGAC GGGATCGTGC GTGCCTACTA CGAGCAGGAC
TACATCCAGC CGCTCACCAA CGGCGACATC TGGATCACCA TGGCCTGGTC CGGTGACATC
TACCAGGTCA ACGCCGAAGA AGGCACCAAC CTCAAGTTCG TTATCCCCGA AGAGGGCGCC
ACGCTGTGGA CGGACAACCT GACGATCCCG ATCACGGCGC AGAACCCGGT CGACGCCCTC
ATGCTCATCG ACTTCTTCTA CGACCCGGAC ATCGCCGCGA GCCTCACCGA GTACATCAAC
TACATCTGCC CGGTGCCGCA CGCGAAGGAA GTACTGCTCG ACCGGGCCGC GGAACTCGAC
GGCGAAGACA GAGAAGCCCT CGAAGAGCTG GCGAACAGCC CCCTCGTCTT CCCCTCCGAG
AGCGACTACG CCAGACTCCA CAACTACGTG GTGTTGGACG TGGAAGCCGG GGAAGACGAA
GAATTCAACT CCATCTTCCA AGCGGTGACC CACGCTTAG
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| Protein sequence | MRRKHTINPA VLRGFTQRRV SRRDTFKLAG LSAAALALAG CGIEGQGQQS TTSENFWNGK
ESNGKVRFVN WPLYMDPEKP ELKRFTEQTG IEVEYSEAIQ DMPSWFGEIQ PLLANGDDIG
ADLMVISNGQ ELTKLIALGY LAPLKRDQLT NFAEFADEFY TMSAYDYGNQ YTVPYASGIT
GIAYDPERVG REITSIKDLW DPEFKGRVGM MRDPQEISNF ALLYNGVAPE DSTPEDWEAA
AEVLKKQRDD GIVRAYYEQD YIQPLTNGDI WITMAWSGDI YQVNAEEGTN LKFVIPEEGA
TLWTDNLTIP ITAQNPVDAL MLIDFFYDPD IAASLTEYIN YICPVPHAKE VLLDRAAELD
GEDREALEEL ANSPLVFPSE SDYARLHNYV VLDVEAGEDE EFNSIFQAVT HA
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