| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0280 |
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| Symbol | |
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| ID | 3579936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 312892 |
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| End bp | 314046 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637683964 |
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| Product | spermidine/putrescine ABC transporter ATP-binding subunit |
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| Protein accession | YP_288341 |
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| Protein GI | 72160684 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACCA CGACGGAAAA AACACCGGCC GCGCCTGGCG TAGTAGCGAC AGAGAGCAAC
CAGGCAGTCC CCGCCATCAG TCTGGAAAAA GTCAGCAAGA CCTACCGATC CGGGCAGGTC
ACCACCACCG CGGTCGAATC CATCGACTTG GAGATCCGTC AAGGGGAGTT CTTCTCCCTG
CTCGGGCCTT CCGGTTGCGG CAAGACCACC ACCATGCGGA TGATCGCCGG CTTCGAGGAG
CCCACTTCAG GAGTCGTGCG CCTGTCCGGT AAAGACGTCA CCGGGGTTCC CCCGAACCGC
CGCGACGTCA ACATGGTCTT CCAAAGCTAC GCCCTGTTCC CGCACATGAC CGTCGCGGAG
AACGTGGCCT TCGGACTGAA ACGCAAGAAA GTCCCCGCGG CCGAGATCCG CACTCGGGTC
GCTGAAATGC TCGAACTCGT CGAGTTGGGG GACCGGGCCA AGTACAAGCC CAGGCAGCTT
TCTGGGGGTC AGCAGCAGCG TGTCGCACTG GCCCGCGCCC TCGTCAACCG GCCGAGCGCA
CTCCTGCTCG ACGAACCTCT CGGTGCTCTT GACCTGAAAC TGCGCCAGGC CATGCAGTTG
GAGCTCAAAC GCATCCAACG CGAGGTCGGC ATCACCTTCG TCTACGTCAC TCACGACCAG
AGTGAAGCGT TGACCATGTC CGACCGCATC GCCGTCATGA ACAAGGGCCG GATCGAACAG
CTCGGCACGC CAGCGCAGAT CTACGAGACC CCCGCGACCC GGTTCGTGGC CGGGTTCATC
GGCACCTCCA ACATCCTCAC CGGGACCGCG CAGCGGGTCT CTGACACTCT CGTCCGCATT
GACTACGGCG GCGACCAGCA CGTCCTCGCG AACACCCCGC AACAAATGTC GGATTTGGGG
CTCGTAATTA CCGTTCGTCC TGAAAAGATC CGACTTGGGA AAGATGTGCC GGATGCCAAT
GTAAGCCGCA TTCGCGGTAC GGTGCGTGAG GTTGTCTATT TGGGAGCAAC GACGCACTAC
ACTGTGCGAA CGGTTGACGA CACCGACATC GTGGTGTTTC AACAGAACTC CTCCGACGCC
AGCAACCTCG CAGATCACGG AGACACCGTG TGGCTGTCCT GGCGTCCCGA GCACTCTTAC
GTGCTTCCAG GCTGA
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| Protein sequence | MATTTEKTPA APGVVATESN QAVPAISLEK VSKTYRSGQV TTTAVESIDL EIRQGEFFSL
LGPSGCGKTT TMRMIAGFEE PTSGVVRLSG KDVTGVPPNR RDVNMVFQSY ALFPHMTVAE
NVAFGLKRKK VPAAEIRTRV AEMLELVELG DRAKYKPRQL SGGQQQRVAL ARALVNRPSA
LLLDEPLGAL DLKLRQAMQL ELKRIQREVG ITFVYVTHDQ SEALTMSDRI AVMNKGRIEQ
LGTPAQIYET PATRFVAGFI GTSNILTGTA QRVSDTLVRI DYGGDQHVLA NTPQQMSDLG
LVITVRPEKI RLGKDVPDAN VSRIRGTVRE VVYLGATTHY TVRTVDDTDI VVFQQNSSDA
SNLADHGDTV WLSWRPEHSY VLPG
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