Gene Tfu_0261 details

Gene Information

• Locus tag: Tfu_0261
• ID: 3579859
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 291938
• End bp: 293980
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637683945
• Product: hypothetical protein
• Protein accession: YP_288322
• Protein GI: 72160665
• COG category: [V] Defense mechanisms
• COG ID: [COG0286] Type I restriction-modification system methyltransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.746292
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATCCA CCCCAGCCGG GACTGCCACC GTGAACTCGG TCGGAATCGC TCGCCTGGCC 
GGAGTGGGAA GGGCAGCCGT CAGCAACTGG CGGCGGCGGT ACCCGGACTT TCCCGCTCCT 
GTCGGCGGAA CCGAGAACAG CCCGCTCTTC GACCTCGCCG AAGTGAAAGA GTGGCTGCGC 
AAGACGAACA AGCTTGCCGA GAAAGAAACC CCTGAAGCCG CGGTGGAGGC GGTGTGGAGC 
CTGCTCGACC CCCTCCGGAG GCACCTGGAC GGGGCTGACG CCGTCGCCTT CCTCGGAGCC 
GCCCTGGCAC TCCGGGACCA GGGTTTCGAG CTGGCGGAAC TCTCCGACGA CGCACTGGGC 
GCCCACCTCC TGGCCCAGCT CGGACCAGAC CCTGATCCGC CGGTGCTGCC CGACCCCGCG 
GTGTGGCGCC GCCCCCTCCT CGAAGCAGTC ACCCGCGTCG GCGTCCTCGG CCCCGCACCG 
GACGCCCTCG AACACCTCCA CCAGCGCTAC CTGTCCTCAG CCTCCCGCCA GCTTTTCGCC 
GACACCCCGA AACTCGGCGC CCTGATCGCG GAACTCGCCG CCCAGCAGAC CGGCACCGTG 
TTCGACCCGT CGTGCGGCAG CGGAACCCTG CTGCACGCGA TGGCACGGCA TGCCCCCGGT 
GTCACCCTCT ACGGACAGGA CATCGACCCT GCGGCTGCCC GCCTCGCCAG AGTCCGCCTG 
CAACTCGCCG GAGCAGACGC CGACATCCGC GTCGGCGACT CGCTGCGCGC GGACGCGTTC 
CCCGGTCTCG CCGCCGACAC GGTGGTCCTC CACCCCCCGT TCAACCAGAC CGACTGGGGG 
TTCGAAGAGC TCAGCTTCGA CTCCCGGTGG CGGTACGGCA CTCCTGCCCG CAAAGAGCCC 
GAACTCGCCT GGGTGCAGCA CGCCCTCGCC CACGTGCGGC CCGGCGGTAC CGCGATCGTT 
GTGCTGCCCC CCGCCGTGGC GTCCCGCGGC AGCGGCCGGC GGGTCCGGCG CGAACTGCTC 
CGGCGTGGCG CGCTGCGCGC GGTCATCGCC CTGCCCACCG GACTCGCCAC CCCGATGGGC 
ACGCCACTGA CCCTGTGGAT CCTCCGCAAC CCGGAAGACA GCACCGACCT GCCCGGCAAG 
GTGCTGCTGT TCGACGCCTC CGATGGGCGC GTCGACGACT CCCCGGAAAG CTCCACCCAG 
CCCTGGTCGG CCGTGGCCCA CGCCATCACC GCCACCTACC GGGAATTCCT CACCGATCCG 
GATGCGGTGG CGAAGACCCC GGGCCGCCAC CGGGCCGTGC CCTTGGCCGA CCTGCTGGAC 
GAGGCAGTGG ACGTCGCCCC CGGGCGCTAC GTGCAGCGGC TGAGCGCCGG CACCGACAAC 
CTGGACGAGA CCCGCAGCGA CCTCATGCGG CTTTCCGAGG ACCTCGTCAC TTCCCTGCCT 
GGGCTGCGTC CCGCCACCGG CACCCTCTAC CAGGCGATGG TCACCCTGGG CGAACTGAGC 
CGCATCGGCG GGTTGGACAT CGTGTACCGG CGTTCCGGAG AGGATCCGGG GGACGACGAA 
CCGTCCCTGC CCGCACTCAC CGCGGAAGAC ATCGAACGCG ACACCGCACC GTCCGGCAGG 
GTCCGCTCGG ACAACAACAC GGTCCAGCTC CAAGCCGGGG ACGTGGTCTT GCCGCGGATC 
GCCCGGCGGC CCGTGGCACG GGTGATCACC GACGAGCAGG CTGCGCTGCA CAGCAGCATC 
TACCTGCTGC GCCCCAATCC CGAAGTGGTC GACCCGTGGT TCCTTGCGGG ATTCCTCACC 
GGTTCAGGAG CCTGCGCGGC GGCCGCATCT ACCAGCCGTC CCGGGGTCAC CCGCATCGCC 
GAGCTCCGCA AAGTGGAGGT GCCCCGCCTG CCGATCGCTG AGCAGCGCGC CTACGGGGAC 
GCGTTTCGTC GCCTCCACGA GTTCCGCCGC ACCCTGCGTC GCACCACCGA GGTCGGCGAC 
CGCTTGTGGT GGCTGCTCAC CGAAGGGCTC GCAGTGGGCA CTCTGCGCCC CGAACAGGAC 
TGA 

 

Protein sequence

MPSTPAGTAT VNSVGIARLA GVGRAAVSNW RRRYPDFPAP VGGTENSPLF DLAEVKEWLR 
KTNKLAEKET PEAAVEAVWS LLDPLRRHLD GADAVAFLGA ALALRDQGFE LAELSDDALG 
AHLLAQLGPD PDPPVLPDPA VWRRPLLEAV TRVGVLGPAP DALEHLHQRY LSSASRQLFA 
DTPKLGALIA ELAAQQTGTV FDPSCGSGTL LHAMARHAPG VTLYGQDIDP AAARLARVRL 
QLAGADADIR VGDSLRADAF PGLAADTVVL HPPFNQTDWG FEELSFDSRW RYGTPARKEP 
ELAWVQHALA HVRPGGTAIV VLPPAVASRG SGRRVRRELL RRGALRAVIA LPTGLATPMG 
TPLTLWILRN PEDSTDLPGK VLLFDASDGR VDDSPESSTQ PWSAVAHAIT ATYREFLTDP 
DAVAKTPGRH RAVPLADLLD EAVDVAPGRY VQRLSAGTDN LDETRSDLMR LSEDLVTSLP 
GLRPATGTLY QAMVTLGELS RIGGLDIVYR RSGEDPGDDE PSLPALTAED IERDTAPSGR 
VRSDNNTVQL QAGDVVLPRI ARRPVARVIT DEQAALHSSI YLLRPNPEVV DPWFLAGFLT 
GSGACAAAAS TSRPGVTRIA ELRKVEVPRL PIAEQRAYGD AFRRLHEFRR TLRRTTEVGD 
RLWWLLTEGL AVGTLRPEQD