| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0228 |
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| Symbol | groEL |
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| ID | 3578903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 256923 |
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| End bp | 258548 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637683912 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_288289 |
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| Protein GI | 72160632 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCCA AACTGATCGC GTTTGACGAG GAAGCCCGGC GCGGCCTCGA GCGCGGTATG
AACCAGCTCG CGGACGCTGT CAAGGTGACG CTCGGCCCCA AGGGCCGCAA CGTCGTCCTT
GAGAAGAAGT GGGGCGCGCC GACCATTACC AACGACGGTG TCTCCATCGC TAAGGAGATC
GAGCTCGAGG ACCCCTACGA GAAGATCGGC GCCGAGCTGG TCAAGGAGGT CGCCAAGAAG
ACCGACGACG TGGCCGGTGA CGGTACCACC ACCGCCACCG TGCTGGCCCA GGCCCTGGTC
CGCGAGGGTC TGCGCAACGT AGCCGCTGGT GCCAACCCCA TCGGCCTGAA GCGCGGTATC
GACGCCGCCG TGGCCCGCAT CAGCGAGGAG CTGGCGAACC TCTCCAAGGA AGTCGAGACC
AAGGAGCAGA TCGCTTCCAC CGCCTCCATC TCCGCGGGCG ACCCGCAGAT CGGCGAGTAC
ATCGCCGAGG CGATGGACAA GGTCGGCAAG GAAGGCGTCA TCACTGTCGA AGAGGGCCAG
ACCTTCGGCC TGGAGCTGGA GCTCGCCGAG GGTATGCGCT TCGACAAGGG CTACATCTCG
CCCTACTTCG CCACCGACCT GGAGCGCATG GAGACGGTCC TCGAGGACCC CTACATCCTC
ATCGCCAACC AGAAGATCTC CAACAACAAC GAGTTCCTTC CGGTCATTGA GAAGGTTCTG
CAGGCCGGCC GCCCGCTGGT CGTCATCGCC GAGGACGTCG AGGGCACCGC GCTGCAGACC
CTGGTGGTCA ACAAGATCCG CGGTACCTTC AAGTCCGTCG CGATCAAGGC CCCCGGCTTC
GGTGACCGCC GCAAGGCCAT GCTGCAGGAC ATCGCGATCC TGACCGGCGG CCAGGTCATC
ACCGAGGAAG TCGGCCTCAA GCTGGAGAAC ACCGAGCTGG ACATGCTCGG CCGGGCCCGC
AAGGTCGTCG TCACCAAGGA CGAGACCACG ATCGTCGACG GTGCTGGCGA CGCCAGCGCG
ATCGCTGGCC GGGTCAACGA GATCCGCGCC GAGATCGAGC GCACCGACTC CGACTACGAC
CGCGAGAAGC TGCAGGAGCG CCTGGCCCGC CTGGCGGGCG GTGTGGCTGT CATCAAGGCC
GGCGCCGCCA CCGAGGTGGA GCTCAAGGAG CGCAAGCACC GCATCGAGGA CGCGGTCCGC
AACGCCAAGG CCGCGGTGGA GGAGGGCATC CTGCCCGGCG GTGGTGTCGC GCTGCTGCAG
GCCAGCATCG CTGCTTTCGA GAAGCTTGAG CTGGAGGGCG ACGAGGCCAT CGGTGCCAGC
ATCGTCCGCC GCGCTGTTGA GGAGCCGCTG AAGCAGATCG CGATCAACGC CGGCTACGAG
GGCGGCGTTG TCGTGGAGAA GGTGAAGAGC CTGGAGCCCG GTATCGGCCT GAACGCGGCC
ACCGGCGAGT ACACCGACCT GTTCAAGGAC GGTGTCATCG ACCCGACCAA GGTCACCCGC
TCCGCGCTGC AGAACGCTGC CTCCATCGCT GGTCTGTTCC TGACCACCGA GGCCGTCATC
GCCGAGAAGC CGGAGAAGCC GGCCGCGAAC AACGCTGGCG GCGACATGGG CGGAATGGAC
TTCTAG
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| Protein sequence | MAAKLIAFDE EARRGLERGM NQLADAVKVT LGPKGRNVVL EKKWGAPTIT NDGVSIAKEI
ELEDPYEKIG AELVKEVAKK TDDVAGDGTT TATVLAQALV REGLRNVAAG ANPIGLKRGI
DAAVARISEE LANLSKEVET KEQIASTASI SAGDPQIGEY IAEAMDKVGK EGVITVEEGQ
TFGLELELAE GMRFDKGYIS PYFATDLERM ETVLEDPYIL IANQKISNNN EFLPVIEKVL
QAGRPLVVIA EDVEGTALQT LVVNKIRGTF KSVAIKAPGF GDRRKAMLQD IAILTGGQVI
TEEVGLKLEN TELDMLGRAR KVVVTKDETT IVDGAGDASA IAGRVNEIRA EIERTDSDYD
REKLQERLAR LAGGVAVIKA GAATEVELKE RKHRIEDAVR NAKAAVEEGI LPGGGVALLQ
ASIAAFEKLE LEGDEAIGAS IVRRAVEEPL KQIAINAGYE GGVVVEKVKS LEPGIGLNAA
TGEYTDLFKD GVIDPTKVTR SALQNAASIA GLFLTTEAVI AEKPEKPAAN NAGGDMGGMD
F
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