| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0216 |
|---|
| Symbol | |
|---|
| ID | 3578929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 244725 |
|---|
| End bp | 245561 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637683900 |
|---|
| Product | helix-hairpin-helix DNA-binding motif-containing protein |
|---|
| Protein accession | YP_288277 |
|---|
| Protein GI | 72160620 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGTC CCACGGTGCG CCGCCGCCAG CTCTCCGCGA TCCTGCGGGA GATGAGGAAG
GCGTCGGGGC TCAGCCTTGA TGCCGTAGCT GCGCGCCTGG AGTGGTCGCG CGCGAAGGTG
GGGCACATCG AAACCGGACA GCGCAAGAAA CCGTCCGTGC TCGAAGTGAA GGCGTTGATG
GCCGAGTACG GGGTGACGCC CGAGGACCCT CGATACGAGA CTGTGTTGAT GTTGACCCGG
CAGGCCCAGG CGCGTGGCTG GTGGCGCCGG TACGACGACC TGTTCCCCGG GTCATATATC
GAGCTGGAGG CTGAGGCGTC CGAGATCCGC ACCTACGAGG CGTTCGTAGT CCCGGGGCTG
TTGCAGACGC CCGGCTATAC ACGGCTGCTC CAGCAGGCCC GCCTGGACCG TGACCCGGAT
GATGTCGAGC GCGCTGTCGA GAGCCGCCGT AAGCGGCAGG AGATCTTCGA CCGGACGTCC
CCGCCCGCGG TGTATGCCAT CATCGAGGAA CATGCGTTGG AGCGGCTGAG GGGCACCCCT
GACGTGCTGG CTGAGCAGGT CGCGCACCTG CTGCATATGG CCGGCCGGAA CTCCGTGACG
CTCCAGGTGC TCCGCACCCG TGTCGGGGTG CACGCGGGGG CGATGGGACC GTTTGTCATC
CTGGACTTCC CGGAACCAGC ATCCCCGGTC GTGTACTTGG AAACATACAC AGATGGCCTG
TTCCTGGAGC GCCGAGAGGA GATCGACCAG TACCGGTCGC TATGGGACCG CATCCGTGAT
GCGGCTCTGC CACCGGACCG GACAGTGGAA TTCCTCCGCT CCCTGCTGAC CTTGTGA
|
|---|
| Protein sequence | MASPTVRRRQ LSAILREMRK ASGLSLDAVA ARLEWSRAKV GHIETGQRKK PSVLEVKALM
AEYGVTPEDP RYETVLMLTR QAQARGWWRR YDDLFPGSYI ELEAEASEIR TYEAFVVPGL
LQTPGYTRLL QQARLDRDPD DVERAVESRR KRQEIFDRTS PPAVYAIIEE HALERLRGTP
DVLAEQVAHL LHMAGRNSVT LQVLRTRVGV HAGAMGPFVI LDFPEPASPV VYLETYTDGL
FLERREEIDQ YRSLWDRIRD AALPPDRTVE FLRSLLTL
|
|---|
| |