Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0216 |
Symbol | |
ID | 3578929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 244725 |
End bp | 245561 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637683900 |
Product | helix-hairpin-helix DNA-binding motif-containing protein |
Protein accession | YP_288277 |
Protein GI | 72160620 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGTC CCACGGTGCG CCGCCGCCAG CTCTCCGCGA TCCTGCGGGA GATGAGGAAG GCGTCGGGGC TCAGCCTTGA TGCCGTAGCT GCGCGCCTGG AGTGGTCGCG CGCGAAGGTG GGGCACATCG AAACCGGACA GCGCAAGAAA CCGTCCGTGC TCGAAGTGAA GGCGTTGATG GCCGAGTACG GGGTGACGCC CGAGGACCCT CGATACGAGA CTGTGTTGAT GTTGACCCGG CAGGCCCAGG CGCGTGGCTG GTGGCGCCGG TACGACGACC TGTTCCCCGG GTCATATATC GAGCTGGAGG CTGAGGCGTC CGAGATCCGC ACCTACGAGG CGTTCGTAGT CCCGGGGCTG TTGCAGACGC CCGGCTATAC ACGGCTGCTC CAGCAGGCCC GCCTGGACCG TGACCCGGAT GATGTCGAGC GCGCTGTCGA GAGCCGCCGT AAGCGGCAGG AGATCTTCGA CCGGACGTCC CCGCCCGCGG TGTATGCCAT CATCGAGGAA CATGCGTTGG AGCGGCTGAG GGGCACCCCT GACGTGCTGG CTGAGCAGGT CGCGCACCTG CTGCATATGG CCGGCCGGAA CTCCGTGACG CTCCAGGTGC TCCGCACCCG TGTCGGGGTG CACGCGGGGG CGATGGGACC GTTTGTCATC CTGGACTTCC CGGAACCAGC ATCCCCGGTC GTGTACTTGG AAACATACAC AGATGGCCTG TTCCTGGAGC GCCGAGAGGA GATCGACCAG TACCGGTCGC TATGGGACCG CATCCGTGAT GCGGCTCTGC CACCGGACCG GACAGTGGAA TTCCTCCGCT CCCTGCTGAC CTTGTGA
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Protein sequence | MASPTVRRRQ LSAILREMRK ASGLSLDAVA ARLEWSRAKV GHIETGQRKK PSVLEVKALM AEYGVTPEDP RYETVLMLTR QAQARGWWRR YDDLFPGSYI ELEAEASEIR TYEAFVVPGL LQTPGYTRLL QQARLDRDPD DVERAVESRR KRQEIFDRTS PPAVYAIIEE HALERLRGTP DVLAEQVAHL LHMAGRNSVT LQVLRTRVGV HAGAMGPFVI LDFPEPASPV VYLETYTDGL FLERREEIDQ YRSLWDRIRD AALPPDRTVE FLRSLLTL
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