| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0205 |
|---|
| Symbol | |
|---|
| ID | 3578917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 232298 |
|---|
| End bp | 233101 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637683888 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_288266 |
|---|
| Protein GI | 72160609 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0716517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAA CCACCCTCCT GCCCCCTGGC CGGGCCGGGC AGCTCGTAGC CGAACTCGGC
GACCGCGCCC GCCTGTGCGA CCTGTACGGG CCGCACGGGG CCCCCATCTA CCACGACATG
TCCCTCCGCG ACACCGGCGA AGTCCGCCAC CTGGTTGGAC TGGTCCGCCC CCACCCGGGC
CCGGTGCTGG ACCTCGCCGC CGGATCGGGG CGGATCACCC TGCCCCTCCT GGCCCTGGGC
CGCGAGGTCA CCGCGTTGGA CCTGTCCGCG GACATGCTGG CGCTGCTCCG GCAGCAACTC
GACCGCGCCC CCGCCCACCT GCGGGAACGC TGCACGGTGG TCCAAGCCGA CATGGCGGAC
TTCCGGCTCC CCCGCCGCTA CGCCGTCATC GTCCTCGGCA CCACCTCGAT CTCGCTGCTG
GACCGGGCGG GCCGCGCCGG ACTGTACCGC TGCGTCGCCG AACACCTCGC CGACGGCGGA
CGGTTCTTCC TCACCACCCT CGACCGAGGC GCGGACTCCC CCGAAGAGGA AGTCGAGATC
ACCGCAACCG GGGCCAGCGG GACCGCCTAC CGCCTCTACG AACACTGGCC CGCCGGTGCC
GACGTCCGCA CCATCACCGT GCTCCCCAGC GAGCTGCCCG ACGGCCCAGT GCCCGTGTGC
ACCGGCCACG TACGGGTGCT CCCCCCAGAC CGCCTTGCCG CCGAGCTCAC CCAGGCCGGG
TTCACCGTCC AGCAGCGGCG CACGCCGCTC GAAGACGCAG GCCGGCACCG GGTGACCCTG
ATCGAAGCGG AGATCCAGCG ATGA
|
|---|
| Protein sequence | MAATTLLPPG RAGQLVAELG DRARLCDLYG PHGAPIYHDM SLRDTGEVRH LVGLVRPHPG
PVLDLAAGSG RITLPLLALG REVTALDLSA DMLALLRQQL DRAPAHLRER CTVVQADMAD
FRLPRRYAVI VLGTTSISLL DRAGRAGLYR CVAEHLADGG RFFLTTLDRG ADSPEEEVEI
TATGASGTAY RLYEHWPAGA DVRTITVLPS ELPDGPVPVC TGHVRVLPPD RLAAELTQAG
FTVQQRRTPL EDAGRHRVTL IEAEIQR
|
|---|
| |