Gene Tfu_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0188 
Symbol 
ID3579957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp210803 
End bp211435 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content74% 
IMG OID637683871 
Product2-keto-3-deoxy-phosphogluconate aldolase 
Protein accessionYP_288249 
Protein GI72160592 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACTTCG CCGACCTCTT CGCCGGCCAG CAGGTCATGG CGATCCTGCG CGGCCTGTCC 
GCACAGGACA CTGTCGCCCA CGCCCACCGC GCTTGGGACC TGGGCATCGC CCTCGTGGAA 
GTTCCCATCC AATCCCCGGA CGCGCTTCCC GCGCTGCGCG CCGCAGTCGC CGCGGGGCGC 
AGCCGCGGCC GCCCGGTGGG GGCAGGAACC GTGACCACCC CGGACCGGGT GGCAGCGGCC 
GCCGACGCAG GAGCCGCGTT CACCGTGGCC CCCGGCTTCG ATGGAGAAGT CCTCGCCGCA 
TCGTTGGCAG CAGGGCTGCC GCACCTGCCC GGCGTCGCAA CCCCCAGCGA GATCCAGCAG 
GCGCTCCGCC ACGGTGCCAC CTGGCTCAAA GCGTTCCCGG CCACCGTGCT CGGCACGGGA 
TGGTTCGCCG CGATGCGCGG TCCGTTCCCC GAGGTCAACT TGGTCGCCAC AGGAGGGGTC 
TCCGCGCACA ACGCCGCGGA CTATCTGGCA GCGGGGGCCC GCGCCGTCGC TGTGGGCTCG 
GCTCTCGCCG ACGAGACCCA GTGGGAGGCG CTCGCCGCCC TCGCCGCCTC CTCAACCGGA 
CCGTGGGGAA GCGGGAGCGG ACCGGCCGCT TAG
 
Protein sequence
MDFADLFAGQ QVMAILRGLS AQDTVAHAHR AWDLGIALVE VPIQSPDALP ALRAAVAAGR 
SRGRPVGAGT VTTPDRVAAA ADAGAAFTVA PGFDGEVLAA SLAAGLPHLP GVATPSEIQQ 
ALRHGATWLK AFPATVLGTG WFAAMRGPFP EVNLVATGGV SAHNAADYLA AGARAVAVGS 
ALADETQWEA LAALAASSTG PWGSGSGPAA