Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0172 |
Symbol | |
ID | 3579750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 196770 |
End bp | 197234 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637683855 |
Product | thioredoxin |
Protein accession | YP_288233 |
Protein GI | 72160576 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCGAA TGCGGAACAA AGCAGCGGCC TCAACCGCTG TACAAGGGAG AAGACCGTTG CTGACGCCAC GATCAGGAGA GCCTGTGGCC ACTATCGAAC TGACCAAGGA CAACTTCAAT CAGACGCTCG AAGAGAACGA CTTCGTCCTC ATCGACTTTT GGGCCTCCTG GTGCGGGCCG TGCAAGATGT TCGCTCCGAT CTTTGAGCGG GCGTCAGAAC GGCACAAGGA CCTGGTGTTC GCCAAGGTCG ACACCGAGGC CCAGCAGGAG CTGGCCGCGA GCTTCAACAT CCAGTCGATT CCGACGCTCA TGATCGTGCG GGATCGGACT GTGCTCTACG CCCAGCCGGG CGCGCTGCCG GAAGCGGCCC TGGAGGACCT GATCCAGCAG GCCCGCGACC TCGACATGGA CGAAGTGCGC CGGCAGATCG CCGAGCAGCA GGGCAACGGC CAAGCGTCGG AGTAG
|
Protein sequence | MPRMRNKAAA STAVQGRRPL LTPRSGEPVA TIELTKDNFN QTLEENDFVL IDFWASWCGP CKMFAPIFER ASERHKDLVF AKVDTEAQQE LAASFNIQSI PTLMIVRDRT VLYAQPGALP EAALEDLIQQ ARDLDMDEVR RQIAEQQGNG QASE
|
| |