| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0162 |
|---|
| Symbol | |
|---|
| ID | 3581562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 186809 |
|---|
| End bp | 187594 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637683845 |
|---|
| Product | 3-oxoadipate enol-lactonase |
|---|
| Protein accession | YP_288223 |
|---|
| Protein GI | 72160566 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTTG TCCCCCTTCA GCACCGCTTC GACGGACCGC GGACCGCACC GGTGGTGGTG
CTGGTCCCCA CCCTCGGCAC GAAGTGGTCG ATGTGGGAGC CGCAGATGCC GGAGCTCACC
CGCCGCTTGC GGGTACTCCG TGTCAACCAC CGCGGCCACG GCTCGTCTCC CGCTCCTCCC
GGCCCCTATT CCATGCAGGA GCTCGGCGGC GACCTGCTGA CCCTCCTCGA CGAGTGTGAC
CTGGAGCAGG TGTCGTTCAT CGGGATCGGT TTGGGGGCGA TGGTGGCGCT GTGGGTGGCT
GCCACGAACC CTTCCCGGGT CTCCCGGCTG GCATTGGTCT CCACCACGGC GTGGGCGCCC
CCGCTGCCCC GTTGGCGCGA CATCGGCGAC CGGGTACGCC ACTTCGGGAT CTCCTCAGTG
ATCGACGAGG TCACCCGCTC CTGGTTCACG CCTGGTTTCT GCGAGCGGCG GCCCGACATT
GTCACCCGGT TCACCGAAGA ATTCGAGAAG ATCTCGCCGG AAGGCTACGC CGGGTGCTGT
GACGCCATCG CCGCCTTGGA CCACCGACCG CTGGCGCGGC TAGTCCACGC ACCCACCGTG
GTGATCGCGG GCGCCCACGA CCCGCAGACC CCGCCGGGTC ACGGCCGCAG GCTCGCAGCC
CTCCTCCCCC ACGCCCGCTT TGAGGTCGTC AGCGGTGCCG CTCACCTCGT CAACGTGGAA
CGCTCCGACG TCGTCAACGA GCTGCTGCTC CAGCACCTGG ACCCGCTCTC GGTCCACTGG
CCTTGA
|
|---|
| Protein sequence | MAVVPLQHRF DGPRTAPVVV LVPTLGTKWS MWEPQMPELT RRLRVLRVNH RGHGSSPAPP
GPYSMQELGG DLLTLLDECD LEQVSFIGIG LGAMVALWVA ATNPSRVSRL ALVSTTAWAP
PLPRWRDIGD RVRHFGISSV IDEVTRSWFT PGFCERRPDI VTRFTEEFEK ISPEGYAGCC
DAIAALDHRP LARLVHAPTV VIAGAHDPQT PPGHGRRLAA LLPHARFEVV SGAAHLVNVE
RSDVVNELLL QHLDPLSVHW P
|
|---|
| |