| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0143 |
|---|
| Symbol | |
|---|
| ID | 3579029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 166709 |
|---|
| End bp | 167503 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637683826 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_288204 |
|---|
| Protein GI | 72160547 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCA ATTCTCGATC TTCCACAACT CGACTTCCCG CACCATCCTC GTGTCCCACC
ACTTTCACTG GAGAGGAGGT CTTCCCCGCC CTCCGAAACG GATCAGCAGT CATCTCCCCG
CCCTCCCTCA TCAACGCGCC ATTGCGCCGA ATCCCCTCCC AGCAGCGCAG CATGGCGCGG
GTCCAGCGCA TGCTCGACGC CTGCGCGGAA CTCCTGGACG AGGCCGGATA CGCCGAACTC
ACCACCACCA AGATCGCGGA ACGCGCCGGG GTCGCGATCG GCTCGGTCTA CCAGTTCTTC
CCCGATAAGA AGGCGATCAC CCAAGCACTC GGCCTGCGCT ATCTCGACAT TTTCAGTGCG
CGGATCGTCC GCCGGATCAC CGAGCAGAAC TTCGACCACT GGACCGAGAC CGTTGACGCG
ATTATCGACG AATACGTCAC TATGCACCGT GAGGAACCCG GATTCCGTTT TCTCCGGTTC
GGTGACGCAA TCGACCCCAA GCTGTTGGAT TCCACACGGG AGAACAATCA AGTCATCGCA
ACGCGCTTAC GCGATCTGCT GATTTCCCTC GCCGGGGCCG TACAAAGTGA GAAGCTTGAC
TTAGCGGTCC TCGTCTCCGT CGAGGCCGCG GACGCGGTGC TCAAAATGGC TTTCCGCGAC
GACGCCGACG GCGACCCCCG TCTCATCACC GCGGCCAAAC AGCTCGTCCG CAGCTATCTG
GAACACGTCT TCGGCGACGA ACCGGACACC GCCCAGGAAC TCCACGAGAG TACAGACGAC
AGGTCACCGG CCTAG
|
|---|
| Protein sequence | MTTNSRSSTT RLPAPSSCPT TFTGEEVFPA LRNGSAVISP PSLINAPLRR IPSQQRSMAR
VQRMLDACAE LLDEAGYAEL TTTKIAERAG VAIGSVYQFF PDKKAITQAL GLRYLDIFSA
RIVRRITEQN FDHWTETVDA IIDEYVTMHR EEPGFRFLRF GDAIDPKLLD STRENNQVIA
TRLRDLLISL AGAVQSEKLD LAVLVSVEAA DAVLKMAFRD DADGDPRLIT AAKQLVRSYL
EHVFGDEPDT AQELHESTDD RSPA
|
|---|
| |