Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0136 |
Symbol | |
ID | 3579022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 159987 |
End bp | 161285 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637683819 |
Product | phosphoserine phosphatase |
Protein accession | YP_288197 |
Protein GI | 72160540 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.357065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCCGCCC GGGACTGGGG TGCCCTGGTC TACGCCACTG TGGTCCAGCA GAGTACCTTT AGAGCCGTCA TGACTCTCGC GAATTCCGTG CCTGAAACCC TGCTGGTGAC GGTCACCGGT AAAGATCGTC CGGGCATCAG CGCTCGACTG CTGAGCACCT TGTCGGTCTT CCCGGTCACC ATCACCGACT TGGAGCAGGT TGTCATTGGT GGGCGTCTGC TCCTGGGCGC TTTGCTGTCG GCCGACGAAC GCGTTGCCCC CGGGGTCCGC AAAGAGCGCC TGTTCGAGGA GATCCGCTCG GCGGTTTCCA AAGTCGCGGT CGATATGGAC ATGGACGTCG ACTTCATGGT CGACGGCGAG CGGGTGCGCC CCTGCACGGG GACCCGCCTC GACGTCACGA TCATGGGGGA CCCGCTGCGT CCAGGCGCGG TCGGCGCCAT CGCTTCCTGT GTGGCACGGG CAGGAGCCAA CATCGACCGT ATCGAACGCT TGGCCAGCTA CCCGGTGACC GCGCTCTCCC TCTCCTTGAC CGGGGGCAAC CTGGAACAGC TCCGCACCGA CCTGGCGTTG GAGGCCGCCA CCCAGTCGGT GGACGTGGCC GTGCAGACGA GCGGCCTCCA CCGGCGGTCC AAGCACCTGG TGGTGATGGA CGTCGACTCC ACGCTCATCC AGTGCGAGGT CATCGAACTG CTCGCCCAGT ACGCGGGCTG CGGGGACGAG GTCGCCCGGA TCACCGAGGA GGCGATGCGC GGTGAACTGG ACTTCGAGGA GTCGCTGCGG CGGCGCGTCG CCCTGCTGAA AGGGCTGGAC GCGAGCATCC TGGAAGAAGT GCGCGAGAAG ATGACGCTCA CCCCGGGAGC GCGCACCCTG ATCCGCACCC TCAAATTCCT CGGCTACGAG TGCGCCATCG TCAGCGGCGG CTTCACCCAG CTCACCGACT ACCTGGTGGA AGAGCTCGGC ATCGACTACT CGGCGGCCAA CGTCCTCGAA ATCGTCGACG GCAAGCTCAC CGGTTCGCTG GTCGGACCGA TCATCGACCG GAAAGGCAAG GCCGCGGCCC TGGAGCGGTT CGCCGCGGAG GCGGGGGTGC CGCTCAGCCA GACCGTGGCG ATCGGCGACG GCGCGAACGA CCTCGACATG CTCCGGGTCG CCGGGCTCGG GGTGGCGTTC AACGCCAAAC CGGTGGTCCG TGCCCAGGCC GACACGTCGG TGAACGTGCC CTACCTCGAC ACGGTGCTCT TCCTGCTGGG GATCTCCCGG GAGGAAGTGG AAGCCGCGGA ACGGGGCAGC TACGCCTGA
|
Protein sequence | MPARDWGALV YATVVQQSTF RAVMTLANSV PETLLVTVTG KDRPGISARL LSTLSVFPVT ITDLEQVVIG GRLLLGALLS ADERVAPGVR KERLFEEIRS AVSKVAVDMD MDVDFMVDGE RVRPCTGTRL DVTIMGDPLR PGAVGAIASC VARAGANIDR IERLASYPVT ALSLSLTGGN LEQLRTDLAL EAATQSVDVA VQTSGLHRRS KHLVVMDVDS TLIQCEVIEL LAQYAGCGDE VARITEEAMR GELDFEESLR RRVALLKGLD ASILEEVREK MTLTPGARTL IRTLKFLGYE CAIVSGGFTQ LTDYLVEELG IDYSAANVLE IVDGKLTGSL VGPIIDRKGK AAALERFAAE AGVPLSQTVA IGDGANDLDM LRVAGLGVAF NAKPVVRAQA DTSVNVPYLD TVLFLLGISR EEVEAAERGS YA
|
| |