| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0128 |
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| Symbol | |
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| ID | 3579014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 150490 |
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| End bp | 151686 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637683811 |
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| Product | pilus assembly protein CpaF |
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| Protein accession | YP_288189 |
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| Protein GI | 72160532 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCC AACTTTCCCT TTCCGGAACA GCGGTGGCGC GACTGCTCGA AGCAGTCCGC
ACCCGGCTCA TGCGCGAGTC GGTGGAACCG ACCCCCGCCG CGGTAGCCGC CGCAGTCCGC
GCGGAAGACA CCACCCTGGG CGACGCCGAA GTGCTGGCGC TCTCCCGGCT CCTCCGCGCC
GACCTCACCG GTGCCGGACC GTTGGAACCC TTGCTCGCCG CCCCGGACAT CACCGACATC
CTGGTCAACG GCCCGCACGA GATCTGGGTG GACGACGGCA CCGGGCTGCG CCGCGTCAAC
GACATTGGCT TCCCCGACGA CGACGCGGTG CGCCGCCTAG CGCAACGGCT GGCAGCCCAG
GCCGGCCGCC GCTTGGATGC GGCGGAACCG TGGGTGGACG CCCAGCTCCC CTCCGGGGCG
CGGCTGCACG CGGTCCTGCC CCCGGTGTCC CCGGAAGGTC CCCGGCTGTC GCTGCGGCTG
CCCCGCCACC GCGTGTTCTC CCTTCCGGAA CTGGTTTCCT TGGGCACGCT TCCCCCGGCA
GGGGCGGCTC TGCTGCATTC CCTCGTGGCC TCCCGGTGCG CTTTCCTCAT CTCCGGCGGC
ACCGGCACCG GGAAGACCAC GCTGCTGTCC ACCCTGCTGT CCCTTGCCGC TCCCACCGAG
CGGCTGGTGC TGGTCGAAGA CGCTGCCGAG CTCCGCCCCG ACCACCCCCA CGTGGTCCGA
TTGCAGTCGC GTCCACCCAA CATCGAAGGG CGCGGCGGAG TGGAACTCCA CGAACTCGTC
CGCCAAGCAC TGCGGATGCG CCCCGACCGG CTCATCGTCG GCGAAGTGCG CGGCCCCGAA
GTCGTCTCCT TGCTGCACGC CCTCAACACG GGCCAGGAAG GCAGCGCGGG GACCCTGCAC
GCCAATACCG CAGCCGACGT CCCCGCCCGT ATCGAAGCAC TGGGGTGCGC GGCCGGGTTG
AGCCGCGAAG CCGTGCACAG CCAGCTCGCC GCCACCCGCG CACTCGTCGT CCACCTGGTC
CGCCCGCCCA GCGGGCCACG CCGCGTCGCC CAAGTGTGCG TTCTGCGCCG CGGGTGCGAC
GGCCTGGTGG CAGCGGTACC GGCGGTCACC TTCACCGCGC ACGGCGACCT GGTGCACGAC
ACCGCGTTCC CCGAATTGTG CGACCGGATC GCTGTACCGC CGGGGAGGGG GCAGTGA
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| Protein sequence | MSSQLSLSGT AVARLLEAVR TRLMRESVEP TPAAVAAAVR AEDTTLGDAE VLALSRLLRA
DLTGAGPLEP LLAAPDITDI LVNGPHEIWV DDGTGLRRVN DIGFPDDDAV RRLAQRLAAQ
AGRRLDAAEP WVDAQLPSGA RLHAVLPPVS PEGPRLSLRL PRHRVFSLPE LVSLGTLPPA
GAALLHSLVA SRCAFLISGG TGTGKTTLLS TLLSLAAPTE RLVLVEDAAE LRPDHPHVVR
LQSRPPNIEG RGGVELHELV RQALRMRPDR LIVGEVRGPE VVSLLHALNT GQEGSAGTLH
ANTAADVPAR IEALGCAAGL SREAVHSQLA ATRALVVHLV RPPSGPRRVA QVCVLRRGCD
GLVAAVPAVT FTAHGDLVHD TAFPELCDRI AVPPGRGQ
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